Soil science in the context of Microbiologist

Agronomy is the science and technology of producing and using plants by agriculture for food, fuel, fiber, chemicals, recreation, or land conservation. Agronomy has come to include research of plant genetics, plant physiology, meteorology, and soil science. It is the application of a combination of sciences such as biology, chemistry, economics, ecology, earth science, and genetics. Professionals of agronomy are termed agronomists.

In classical soil science, humus is the dark organic matter in soil that is formed by the decomposition of plant, microbial and animal matter. It is a kind of soil organic matter with distinct properties due to its high surface area. It is rich in nutrients and retains moisture in the soil, more especially in soils with a sandy texture. Humus is the Latin word for "earth" or "ground".

In agriculture, "humus" sometimes also is used to describe mature or natural compost extracted from a woodland or other spontaneous source for use as a soil conditioner. It is also used to describe a topsoil horizon that contains organic matter (humus type, humus form, or humus profile).

Pedology (from Greek: πέδον, pedon, "soil"; and λόγος, logos, "study") is a discipline within soil science which focuses on understanding and characterizing soil formation, evolution, and the theoretical frameworks for modeling soil bodies, often in the context of the natural environment. Pedology is often seen as one of two main branches of soil inquiry, the other being edaphology which is traditionally more agronomically oriented and focuses on how soil properties influence plant communities (natural or cultivated).

In studying the fundamental phenomenology of soils, e.g. soil formation (aka pedogenesis), pedologists pay particular attention to observing soil morphology and the geographic distributions of soils, and the placement of soil bodies into larger temporal and spatial contexts. In so doing, pedologists develop systems of soil classification, soil maps, and theories for characterizing temporal and spatial interrelations among soils. There are a few noteworthy sub-disciplines of pedology; namely pedometrics and soil geomorphology. Pedometrics focuses on the development of techniques for quantitative characterization of soils, especially for the purposes of mapping soil properties whereas soil geomorphology studies the interrelationships between geomorphic processes and soil formation.

Agricultural economics is an applied field of economics concerned with the application of economic theory in optimizing the production and distribution of food and fiber products. Agricultural economics began as a branch of economics that specifically dealt with land usage. It focused on maximizing the crop yield while maintaining a good soil ecosystem. Throughout the 20th century the discipline expanded and the current scope of the discipline is much broader. Agricultural economics today includes a variety of applied areas, having considerable overlap with conventional economics. Agricultural economists have made substantial contributions to research in economics, econometrics, development economics, and environmental economics. Agricultural economics influences food policy, agricultural policy, and environmental policy.

Infiltration is the process by which water on the ground surface enters the soil. It is commonly used in both hydrology and soil sciences. The infiltration capacity is defined as the maximum rate of infiltration. It is most often measured in meters per day but can also be measured in other units of distance over time if necessary.  The infiltration capacity decreases as the soil moisture content of soils surface layers increases. If the precipitation rate exceeds the infiltration rate, runoff will usually occur unless there is some physical barrier.

Infiltrometers, parameters and rainfall simulators are all devices that can be used to measure infiltration rates.

In astronomy or planetary science, the frost line, also known as the snow line or ice line, is the minimum distance from the central protostar of a solar nebula where the temperature is low enough for volatile compounds such as water, ammonia, methane, carbon dioxide and carbon monoxide to condense into solid grains, which will allow their accretion into planetesimals. Beyond the line, otherwise gaseous compounds (which are much more abundant) can be quite easily condensed to allow formation of gas giants and ice giants; while within it, only heavier compounds can be accreted to form the typically much smaller rocky planets.

The term itself is borrowed from the notion of "frost line" in soil science, which describes the maximum depth from the surface that groundwater can freeze.

Robert Elmer Horton (May 18, 1875 – April 22, 1945) was an American hydrologist, geomorphologist, civil engineer, and soil scientist, considered by many to be the father of modern American hydrology. An eponymous medal is awarded by the American Geophysical Union (AGU) to recognize outstanding contributions to the field of hydrological geophysics. The AGU Hydrology section (representing about a 3rd of AGU's membership) was formed largely due to his personal property (near New York) that was bequeathed to AGU.

Geobiology is a field of scientific research that explores the interactions between the physical Earth and the biosphere. It is a relatively young field, and its borders are fluid. There is considerable overlap with the fields of ecology, evolutionary biology, microbiology, paleontology, and particularly soil science and biogeochemistry. Geobiology applies the principles and methods of biology, geology, and soil science to the study of the ancient history of the co-evolution of life and Earth as well as the role of life in the modern world. Geobiologic studies tend to be focused on microorganisms, and on the role that life plays in altering the chemical and physical environment of the pedosphere, which exists at the intersection of the lithosphere, atmosphere, hydrosphere and/or cryosphere. It differs from biogeochemistry in that the focus is on processes and organisms over space and time rather than on global chemical cycles.

Geobiological research synthesizes the geologic record with modern biologic studies. It deals with process - how organisms affect the Earth and vice versa - as well as history - how the Earth and life have changed together. Much research is grounded in the search for fundamental understanding, but geobiology can also be applied, as in the case of microbes that clean up oil spills.

In geology, eluvium or eluvial deposits are geological deposits and soils that are derived by in situ weathering or weathering plus gravitational movement or accumulation.

The process of removal of materials from geological or soil horizons is called eluviation or leaching. There is a difference in the usage of this term in geology and soil science. In soil science, eluviation is the transport of soil material from upper layers of soil to lower levels by downward percolation of water across soil horizons, and accumulation of this material (illuvial deposit) in lower levels is called illuviation. In geology, the removed material is irrelevant, and the deposit (eluvial deposit) is the remaining material. Eluviation occurs when precipitation exceeds evaporation.

This is a glossary of some of the terms used in phytopathology.

Phytopathology is the study of plant diseases. It is a multi-disciplinary science since prerequisites for disease development are the presence of a susceptible host species, a pathogen and the appropriate environmental conditions. This is known as the disease triangle. Because of this interaction, the terminology used in phytopathology often comes from other disciplines including those dealing with the host species ( botany / plant science, plant physiology), the pathogen (bacteriology, mycology, nematology, virology), the environment and disease management practices (agronomy, soil science, meteorology, environmental science, ecology, plant breeding, pesticides, entomology), and areas of study that apply to both the host and pathogen (molecular biology, genetics, molecular genetics). The result is that most phytopathological glossary include terms from these other disciplines in addition to terms (disease incidence, horizontal resistance, gene-for-gene relationship, blast, scab and so on) that are specific to, or which have a unique meaning in phytopathology. This glossary is no exception. However, for the sake of brevity, it has, for the most part, restricted terms from other disciplines to those that pertain to the pathogen. At some point, these terms should be moved to other glossaries (e.g. glossary of mycology, glossary of nematology, and so on).

A nature trail (sometimes nature walk, educational path, educational trail, or interpretive trail) is a specially developed hiking trail or footpath that runs through the countryside, along which there are marked stations or stops next to points of natural, technological or cultural interest. These may convey information about, for example, flora and fauna, soil science, geology, mining, ecology or cultural history. Longer trails that link more widely spaced natural phenomena or structures together may be referred to as themed trails or paths.

In order to give a clearer explanation of the objects located at each station, interpretive signs or other exhibits are usually erected, in keeping with the purpose of the trail. These may include: information boards, photographs and pictures, maps or plans, display cases and models, slides, sound or multimedia devices, facilities to enable experimentation and so on. The routes are regularly maintained.

In soil science, peds are aggregates of soil particles formed naturally as a result of pedogenic processes; this natural organization of particles forms discrete units separated by pores or voids. The term is generally used for macroscopic (visible; i.e. greater than 1 mm in size) structural units when observing soils in the field. Soil peds should be described when the soil is dry or slightly moist, as they can be difficult to distinguish when wet.An artificially formed aggregate of soil particles can be called a clod.

There are five major classes of macrostructure seen in soils: platy, prismatic, columnar, granular, and blocky. There are also structureless conditions. Some soils have simple structure, each unit being an entity without component smaller units. Others have compound structure, in which large units are composed of smaller units separated by persistent planes of weakness.

Earth's critical zone is the “heterogeneous, near surface environment in which complex interactions involving rock, soil, water, air, and living organisms regulate the natural habitat and determine the availability of life-sustaining resources” (National Research Council, 2001). The Critical Zone, surface and near-surface environment, sustains nearly all terrestrial life.

The critical zone is an interdisciplinary field of research exploring the interactions among the land surface, vegetation, and water bodies, and extends through the pedosphere, unsaturated vadose zone, and saturated groundwater zone. Critical Zone science is the integration of Earth surface processes (such as landscape evolution, weathering, hydrology, geochemistry, and ecology) at multiple spatial and temporal scales and across anthropogenic gradients. These processes impact mass and energy exchange necessary for biomass productivity, chemical cycling, and water storage.

Thickness in geology and mining refers to the distance across a packet of rock, whether it be a facies, stratum, bed, seam, lode etc.

Thickness is measured at right angles to the surface of the seam or bed and thus independently of its spatial orientation. The concept of thickness came originally from mining language, where it was used mainly to indicate the workability of seams. It has since become an established term in earth science, for example in geology, for the depth of sedimentary rocks, in hydrogeology for the vertical extent of groundwater – i.e. the distance from the base of the groundwater layer to its surface – or in soil science for the vertical extent of soil horizons.

Sergei Nikolaevich Winogradsky ForMemRS (Russian: Сергей Николаевич Виноградский; Ukrainian: Сергій Миколайович Виноградський; 13 September [O.S. 1 September] 1856 – 24 February 1953), also published under the name Sergius Winogradsky, was a Ukrainian microbiologist, ecologist and soil scientist who pioneered the cycle-of-life concept. Winogradsky discovered the first known form of lithotrophy during his research with Beggiatoa in 1887. He reported that Beggiatoa oxidized hydrogen sulfide (H₂S) as an energy source and formed intracellular sulfur droplets. This research provided the first example of lithotrophy, but not autotrophy. Born in the capital of present-day Ukraine, his legacy is also celebrated by this nation.

His research on nitrifying bacteria would report the first known form of chemoautotrophy, showing how a lithotroph fixes carbon dioxide (CO₂) to make organic compounds.

Edaphology (from Greek ἔδαφος, edaphos 'ground' + -λογία, -logia) is concerned with the influence of soils on living beings, particularly plants. It is one of two main divisions of soil science, the other being pedology. Edaphology includes the study of how soil influences humankind's use of land for plant growth as well as people's overall use of the land. General subfields within edaphology are agricultural soil science (known by the term agrology in some regions) and environmental soil science. Pedology deals with pedogenesis, soil morphology, and soil classification.

In soil science, mineralization is the decomposition (i.e., oxidation) of the chemical compounds in organic matter, by which the nutrients in those compounds are released in soluble inorganic forms that may be available to plants. Mineralization is the opposite of immobilization.

Mineralization increases the bioavailability of the nutrients that were in the decomposing organic compounds, most notably (because of their quantities) nitrogen, phosphorus, and sulfur. Whether the decomposition of an organic compound will result in mineralization or immobilization is dependent on its concentration proportionate to that of the carbon in the organic matter. As a rule of thumb, if the concentration of a specific element exceeds the needs of the decomposer for biosynthesis or storage, then it will mineralize.

A soil type is a taxonomic unit in soil science. All soils that share a certain set of well-defined properties form a distinctive soil type. Soil type is a technical term of soil classification, the science that deals with the systematic categorization of soils. Every soil of the world belongs to a certain soil type. Soil type is an abstract term. In nature, you will not find soil types. You will find soils that belong to a certain soil type.

In hierarchical soil classification systems, soil types mostly belong to the higher or intermediate level. A soil type can normally be subdivided into subtypes, and in many systems several soil types can be combined to entities of higher category. However, in the first classification system of the United States (Whitney, 1909), the soil type was the lowest level and the mapping unit.