Phylogenetic in the context of Isoptera


Phylogenetic in the context of Isoptera

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⭐ Core Definition: Phylogenetic

In biology, phylogenetics (/ˌfləˈnɛtɪks, -lə-/) is the study of the evolutionary history of life using observable characteristics of organisms (or genes), which is known as phylogenetic inference. It infers the relationship among organisms based on empirical data and observed heritable traits of DNA sequences, protein amino acid sequences, and morphology. The results are a phylogenetic tree—a diagram depicting the hypothetical relationships among the organisms, reflecting their inferred evolutionary history.

The tips of a phylogenetic tree represent the observed entities, which can be living taxa or fossils. A phylogenetic diagram can be rooted or unrooted. A rooted tree diagram indicates the hypothetical common ancestor of the taxa represented on the tree. An unrooted tree diagram (a network) makes no assumption about directionality of character state transformation, and does not show the origin or "root" of the taxa in question.

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Phylogenetic in the context of Palaeontology

Paleontology or palaeontology is the scientific study of the past, mainly but not exclusively through the study of fossils. Paleontologists use fossils as a means to classify organisms, measure geologic time, and assess the interactions between prehistoric organisms and their natural environment. While paleontological observations are known from at least the 6th century BC, the foundation of paleontology as a science dates back to the work of Georges Cuvier in 1796. Cuvier demonstrated evidence for the concept of extinction and how the life of the past was not necessarily the same as that of the present. The field developed rapidly over the course of the following decades, and the French word paléontologie was introduced for the study in 1822, which was derived from the Ancient Greek word for 'ancient' and words describing relatedness and a field of study. Further advances in the field accompanied the work of Charles Darwin who popularized the concept of evolution. Together, evolution and extinction can be understood as complementary processes that shaped the history of life.

Paleontology overlaps the most with the fields of geology and biology. It draws on technology and analysis of a wide range of sciences to apply them to the study of life and environments of the past, particularly for the subdisciplines of paleobiology and paleoecology that are analogous to biology and ecology. Paleontology also contributes to other sciences, being utilized for biostratigraphy to reconstruct the geologic time scale of Earth, or in studies on extinction to establish both external and internal factors that can lead to the disappearance of a species. Much of the history of life is now better understood because of advances in paleontology and the increase in interdisciplinary studies. Several improvements in understanding have occurred from the introduction of theoretical analysis to paleontology in the 1950s and 1960s which led to the rise of more focused fields of paleontology that assess the changing geography and climate of Earth, the phylogenetic relationships between different species, and the analysis of how fossilization occurs and what biases can impact the quality of the fossil record.

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Phylogenetic in the context of Protist

A protist (/ˈprtɪst/ PROH-tist) or protoctist is any eukaryotic organism that is not an animal, land plant, or fungus. Protists do not form a natural group, or clade, but are a paraphyletic grouping of all descendants of the last eukaryotic common ancestor excluding land plants, animals, and fungi.

Protists were historically regarded as a separate taxonomic kingdom known as Protista or Protoctista. With the advent of phylogenetic analysis and electron microscopy studies, the use of Protista as a formal taxon was gradually abandoned. In modern classifications, protists are spread across several eukaryotic clades called supergroups, such as Archaeplastida (photoautotrophs that includes land plants), SAR, Obazoa (which includes fungi and animals), Amoebozoa and "Excavata".

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Phylogenetic in the context of Common ostrich

The common ostrich (Struthio camelus), or simply ostrich, is a species of flightless bird native to certain areas of Africa. It is one of two extant species of ostriches, the only living members of the genus Struthio in the ratite group of birds. The other is the Somali ostrich (Struthio molybdophanes), which has been recognized as a distinct species by BirdLife International since 2014, having been previously considered a distinctive subspecies of ostrich.

The common ostrich belongs to the order Struthioniformes. Struthioniformes previously contained all the ratites, such as the kiwis, emus, rheas, and cassowaries. However, recent genetic analysis has found that the group is not monophyletic, as it is paraphyletic with respect to the tinamous, so the ostriches are now classified as the only members of the order. Phylogenetic studies have shown that it is the sister group to all other members of Palaeognathae, and thus the flighted tinamous are the sister group to the extinct moa. It is distinctive in its appearance, with a long neck and legs, and can run for a long time at a speed of 55 km/h (34 mph) with short bursts up to about 70 km/h (43 mph), the fastest land speed of any bipedal animal. The common ostrich is the largest living species of bird and thus the largest living dinosaur. It lays the largest eggs of any living bird (the extinct giant elephant bird (Aepyornis maximus) of Madagascar and the south island giant moa (Dinornis robustus) of New Zealand laid larger eggs).

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Phylogenetic in the context of Termite

Termites are a group of detritophagous eusocial cockroaches which consume a variety of decaying plant material, generally in the form of wood, leaf litter, and soil humus. They are distinguished by their moniliform antennae and the soft-bodied, unpigmented worker caste for which they have been commonly termed "white ants"; however, they are not ants but highly derived cockroaches. About 2,997 extant species are currently described, 2,125 of which are members of the family Termitidae.

Termites comprise the infraorder Isoptera, or alternatively the epifamily Termitoidae, within the order Blattodea (the cockroaches). Termites were once classified in a separate order from cockroaches, but recent phylogenetic studies indicate that they evolved from cockroaches, as they are deeply nested within the group, and the sister group to wood-eating cockroaches of the genus Cryptocercus. Previous estimates suggested the divergence took place during the Jurassic or Triassic. More recent estimates suggest that they have an origin during the Late Jurassic, with the first fossil records in the Early Cretaceous.

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Phylogenetic in the context of Trebouxiophyceae

The Trebouxiophyceae, also known as trebouxiophytes, are a class of green algae, in the division Chlorophyta. Members of this class are single-celled, colonial, or multicellular and are found in freshwater, terrestrial or marine habitats worldwide. Many taxa in the Trebouxiophyceae form symbiotic relationships with other organisms; in particular, the majority of phycobionts within lichens are trebouxiophytes. A number of taxa have also lost the ability to photosynthesize, and have evolved to become parasitic; examples include Prototheca and Helicosporidium.

Trebouxiophyceae was originally defined by ultrastructural characteristics, but is now generally circumscribed based on phylogenetics, particularly based on the 18S rDNA locus. As of 2024, Trebouxiophyceae contains 211 genera and about 925 species.

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Phylogenetic in the context of Dikaryan

Dikarya is a subkingdom of Fungi that includes the divisions Ascomycota and Basidiomycota, both of which in general produce dikaryons, may be filamentous or unicellular, but are always without flagella. The Dikarya are most of the so-called "higher fungi", but also include many anamorphic species that would have been classified as molds in historical literature. Phylogenetically the two divisions regularly group together. In a 1998 publication, Thomas Cavalier-Smith referred to this group as the Neomycota.

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Phylogenetic in the context of Antecedent (genealogy)

In genealogy and in phylogenetic studies of evolutionary biology, antecedents or antecessors are predecessors in a family line. For example, one is the descendant of their grandparents, who are one's antecedents. This term has particular utility in evolutionary coalescent theory, which models the process of genetic drift in reverse time.

The antonym of antecedent is descendant.

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Phylogenetic in the context of Basidiomycota

The Basidiomycota (/bəˌsɪdi.mˈktə/) are one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. This division includes: agarics, puffballs, stinkhorns, bracket fungi, other polypores, jelly fungi, boletes, chanterelles, earth stars, smuts, bunts, rusts, mirror yeasts, and Cryptococcus, the human pathogenic yeast.

Basidiomycota are filamentous fungi composed of hyphae (except for basidiomycota-yeast) and reproduce sexually via the formation of specialized club-shaped end cells called basidia that normally bear external meiospores (usually four). These specialized spores are called basidiospores. However, some Basidiomycota are obligate asexual reproducers. Basidiomycota that reproduce asexually (discussed below) can typically be recognized as members of this division by gross similarity to others, by the formation of a distinctive anatomical feature (the clamp connection), cell wall components, and definitively by phylogenetic molecular analysis of DNA sequence data.

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Phylogenetic in the context of Ascomycota

The Ascomycota are a phylum in the kingdom Fungi that, together with the Basidiomycota, form the subkingdom Dikarya. Members of Ascomycota are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The defining feature of this fungal group is the ascus (from Ancient Greek ἀσκός (askós) 'sac, wineskin'), a microscopic sexual structure in which nonmotile spores, called ascospores, are formed. However, some species of Ascomycota are asexual and thus do not form asci or ascospores. Familiar examples of sac fungi include morels, truffles, brewers' and bakers' yeast, dead man's fingers, and cup fungi. The fungal symbionts in the majority of lichens (loosely termed "ascolichens") such as Cladonia belong to the Ascomycota.

Ascomycota are a monophyletic group (containing all of the descendants of a common ancestor). Previously placed in the Basidiomycota along with asexual species from other fungal taxa, asexual (or anamorphic) ascomycetes are now identified and classified based on morphological or physiological similarities to ascus-bearing taxa, and by phylogenetic analyses of DNA sequences.

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Phylogenetic in the context of Water buffalo

The water buffalo (Bubalus bubalis), also called domestic water buffalo, Asian water buffalo and Asiatic water buffalo, is a large bovine originating in the Indian subcontinent and Southeast Asia. Today, it is also kept in Italy, the Balkans, Australia, the Americas, and some African countries. Two extant types of water buffalo are recognized, based on morphological and behavioural criteria: the river buffalo of the Indian subcontinent and further west to the Balkans, Egypt, and Italy; and the swamp buffalo from Assam in the west through Southeast Asia to the Yangtze Valley of China in the east.

The wild water buffalo (Bubalus arnee) is most probably the ancestor of the domestic water buffalo. Results of a phylogenetic study indicate that the river-type water buffalo probably originated in western India and was domesticated about 6,300 years ago, whereas the swamp-type originated independently from Mainland Southeast Asia and was domesticated about 3,000 to 7,000 years ago. The river buffalo dispersed west as far as Egypt, the Balkans, and Italy; while swamp buffalo dispersed to the rest of Southeast Asia and up to the Yangtze Valley.

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Phylogenetic in the context of Paleontologists

Paleontology or palaeontology is the scientific study of the life of the past, mainly but not exclusively through the study of fossils. Paleontologists use fossils as a means to classify organisms, measure geologic time, and assess the interactions between prehistoric organisms and their natural environment. While paleontological observations are known from at least the 6th century BC, the foundation of paleontology as a science dates back to the work of Georges Cuvier in 1796. Cuvier demonstrated evidence for the concept of extinction and how the life of the past was not necessarily the same as that of the present. The field developed rapidly over the course of the following decades, and the French word paléontologie was introduced for the study in 1822, which was derived from the Ancient Greek word for 'ancient' and words describing relatedness and a field of study. Further advances in the field accompanied the work of Charles Darwin who popularized the concept of evolution. Together, evolution and extinction can be understood as complementary processes that shaped the history of life.

Paleontology overlaps the most with the fields of geology and biology. It draws on technology and analysis of a wide range of sciences to apply them to the study of life and environments of the past, particularly for the subdisciplines of paleobiology and paleoecology that are analogous to biology and ecology. Paleontology also contributes to other sciences, being utilized for biostratigraphy to reconstruct the geologic time scale of Earth, or in studies on extinction to establish both external and internal factors that can lead to the disappearance of a species. Much of the history of life is now better understood because of advances in paleontology and the increase in interdisciplinary studies. Several improvements in understanding have occurred from the introduction of theoretical analysis to paleontology in the 1950s and 1960s which led to the rise of more focused fields of paleontology that assess the changing geography and climate of Earth, the phylogenetic relationships between different species, and the analysis of how fossilization occurs and what biases can impact the quality of the fossil record.

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Phylogenetic in the context of Digitalis

Digitalis (/ˌdɪɪˈtlɪs/ or /ˌdɪɪˈtælɪs/) is a genus of about 20 species of herbaceous perennial plants, shrubs, and biennials, commonly called foxgloves.

Digitalis is native to Europe, Western Asia, and northwestern Africa. The flowers are tubular in shape, produced on a tall spike, and vary in colour with species, from purple to pink, white, and yellow. The name derives from the Latin word for "finger". The genus was traditionally placed in the figwort family, Scrophulariaceae, but phylogenetic research led taxonomists to move it to the Veronicaceae in 2001. More recent phylogenetic work has placed it in the much enlarged family Plantaginaceae.

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Phylogenetic in the context of Evolution of lemurs

Lemurs, primates belonging to the suborder Strepsirrhini which branched off from other primates less than 63 million years ago, evolved on the island of Madagascar, for at least 40 million years. They share some traits with the most basal primates, and thus are often confused as being ancestral to modern monkeys, apes, and humans. Instead, they merely resemble ancestral primates.

Lemurs are thought to have evolved during the Eocene or earlier, sharing a closest common ancestor with lorises, pottos, and galagos (lorisoids). Fossils from Africa and some tests of nuclear DNA suggest that lemurs made their way to Madagascar between 40 and 52 mya. Other mitochondrial and nuclear DNA sequence comparisons offer an alternative date range of 62 to 65 mya. An ancestral lemur population is thought to have inadvertently rafted to the island on a floating mat of vegetation, although hypotheses for land bridges and island hopping have also been proposed. The timing and number of hypothesized colonizations has traditionally hinged on the phylogenetic affinities of the aye-aye, the most basal member of the lemur clade.

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