Peer review in the context of Institutional repository

Early Islamic philosophy or classical Islamic philosophy is a period of intense philosophical development beginning in the 2nd century AH of the Islamic calendar (early 9th century CE) and lasting until the 6th century AH (late 12th century CE). The period is known as the Islamic Golden Age, and the achievements of this period had a crucial influence in the development of modern philosophy and science. For Renaissance Europe, "Muslim maritime, agricultural, and technological innovations, as well as much East Asian technology via the Muslim world, made their way to western Europe in one of the largest technology transfers in world history." This period starts with al-Kindi in the 9th century and ends with Averroes (Ibn Rushd) at the end of 12th century. The death of Averroes effectively marks the end of a particular discipline of Islamic philosophy usually called the Peripatetic Arabic School, and philosophical activity declined significantly in Western Islamic countries, namely in Islamic Spain and North Africa, though it persisted for much longer in the Eastern countries, in particular Persia and India where several schools of philosophy continued to flourish: Avicennism, Illuminationist philosophy, Mystical philosophy, and Transcendent theosophy.

Intellectual innovations, achievements, and advancements of this period included, within jurisprudence, the development of ijtihad, a method or methodological approach to legal reasoning, interpretation, and argument based on independent inquiry and analogical deduction; within science and the philosophy of science, the development of empirical research methods emphasizing controlled experimentation, observational evidence, and reproducibility, as well as early formulations of empiricist epistemologies; commentaries and developments in Aristotelian logic, as well as innovations in non-Aristotelian temporal modal logic and inductive logic; and developments in research practice and methodology, including, within medicine, the first documented peer review process and within jurisprudence and theology, a strict science of citation, the isnad or "backing".

Natural science or empirical science is a branch of science concerned with the description, understanding, and prediction of natural phenomena, based on empirical evidence from observation and experimentation. Mechanisms such as peer review and reproducibility of findings are used to try to ensure the validity of scientific advances.

Natural science can be divided into two main branches: life science and physical science. Life science is alternatively known as biology. Physical science is subdivided into physics, astronomy, Earth science, and chemistry. These branches of natural science may be further divided into more specialized branches, also known as fields. As empirical sciences, natural sciences use tools from the formal sciences, such as mathematics and logic, converting information about nature into measurements that can be explained as clear statements of the "laws of nature".

Scientific citation is the process of systematically acknowledging sources from which information, data, ideas, or direct quotations are drawn in scholarly work.Sources in science are typically previously published peer-reviewed journal articles, books, theses or dissertations, conference papers, and rarely private or public communications. Citations connect a researcher's work with existing literature, ensuring transparency, academic integrity, and safe outcomes such as in medical science. Effective citation practices require clear, standardized mechanisms for referencing materials, particularly crucial as electronic publishing and online data repositories expand rapidly.

Scientists generate new knowledge by practicing the scientific method on the thoughts, ideas, and work that scientists did before them. By applying scholarly principles, scientists may report their findings which become part of the chain of knowledge. Citations profoundly shape the structure of scientific knowledge by explicitly linking new research with existing academic literature. They define line of thought, give context to research within larger academic debates, and contribute to shared scholarly memory. Accurate citation practices that knowledge is verifiable, essential for scientific advancement.

Mathematical practice comprises the working practices of professional mathematicians: selecting theorems to prove, using informal notations to persuade themselves and others that various steps in the final proof are convincing, and seeking peer review and publication, as opposed to the end result of proven and published theorems.

Philip Kitcher has proposed a more formal definition of a mathematical practice, as a quintuple. His intention was primarily to document mathematical practice through its historical changes.

Pseudoscience consists of statements, beliefs, or practices that claim to be scientific or factual but are inherently incompatible with the scientific method. Pseudoscience is often characterized by contradictory, exaggerated or unfalsifiable claims; reliance on confirmation bias rather than rigorous attempts at refutation; lack of openness to evaluation by other experts; absence of systematic practices when developing hypotheses; and continued adherence long after the pseudoscientific hypotheses have been experimentally discredited. It is not the same as junk science.

The demarcation between science and pseudoscience has scientific, philosophical, and political implications. Philosophers debate the nature of science and the general criteria for drawing the line between scientific theories and pseudoscientific beliefs, but there is widespread agreement "that creationism, astrology, homeopathy, Kirlian photography, dowsing, ufology, ancient astronaut theory, Holocaust denialism, Velikovskian catastrophism, and climate change denialism are pseudosciences." There are implications for health care, the use of expert testimony, and weighing environmental policies. Recent empirical research has shown that individuals who indulge in pseudoscientific beliefs generally show lower evidential criteria, meaning they often require significantly less evidence before coming to conclusions. This can be coined as a 'jump-to-conclusions' bias that can increase the spread of pseudoscientific beliefs. Addressing pseudoscience is part of science education and developing scientific literacy.

An academic journal (or scholarly journal) is a periodical publication in which scholarship relating to a particular academic discipline is published. They serve as permanent and transparent forums for the dissemination, scrutiny, and discussion of research. Unlike professional magazines or trade magazines, the articles are mostly written by researchers rather than staff writers employed by the journal. They nearly universally require peer review for research articles or other scrutiny from contemporaries competent and established in their respective fields. Academic journals trace their origins back to the 17th century, with the Philosophical Transactions of the Royal Society being established in 1665 as the first scientific journal.

As of 2012, it is estimated that over 28,100 active academic journals are in publication, with scopes ranging from the general sciences, as seen in journals like Science and Nature, to highly specialized fields. These journals publish a variety of articles including original research, review articles, and perspectives. The advent of electronic publishing has made academic journals more accessible.

In natural and social science research, a protocol is most commonly a predefined procedural method in the design and implementation of an experiment. Protocols are written whenever it is desirable to standardize a laboratory method to ensure successful replication of results by others in the same laboratory or by other laboratories. Additionally, and by extension, protocols have the advantage of facilitating the assessment of experimental results through peer review. In addition to detailed procedures, equipment, and instruments, protocols will also contain study objectives, reasoning for experimental design, reasoning for chosen sample sizes, safety precautions, and how results were calculated and reported, including statistical analysis and any rules for predefining and documenting excluded data to avoid bias.

Similarly, a protocol may refer to the procedural methods of health organizations, commercial laboratories, manufacturing plants, etc. to ensure their activities (e.g., blood testing at a hospital, testing of certified reference materials at a calibration laboratory, and manufacturing of transmission gears at a facility) are consistent to a specific standard, encouraging safe use and accurate results.

Scientific consensus is the majority judgment and position by active, qualified experts in a specific scientific discipline to establish a conclusion or fact. Scientific consensus results from the self-correcting scientific process of peer review, replication of the event through the scientific method, scholarly debate, meta-analysis, and publication of high-quality review articles, monographs, or guidelines in reputable books and journals to establish facts and durable knowledge about the topic.

Reaching consensus requires significant scientific agreement among qualified experts, a process based on scientific substantiation of a claim that meets the burden of proof by proposing a possible cause-and-effect mechanism supported by the totality of evidence, leading to agreement among experts. In many countries, scientific consensus established on significant scientific agreement is the basis for regulatory approval of drugs to specify a health claim for the properties of the approved therapeutic agent.

Nature is a British weekly scientific journal founded and based in London, England. As a multidisciplinary publication, Nature features peer-reviewed research from a variety of academic disciplines, mainly in science and technology. It has core editorial offices across the United States, continental Europe, and Asia under the international scientific publishing company Springer Nature. Nature was one of the world's most cited scientific journals by the Science Edition of the 2022 Journal Citation Reports (with an ascribed impact factor of 50.5), making it one of the world's most-read and most prestigious academic journals. As of 2012, it claimed an online readership of about three million unique readers per month.

Founded in the autumn of 1869, Nature was first circulated by Norman Lockyer and Alexander MacMillan as a public forum for scientific innovations. The mid-20th century facilitated an editorial expansion for the journal; Nature redoubled its efforts in explanatory and scientific journalism. The late 1980s and early 1990s saw the creation of a network of editorial offices outside of Britain and the establishment of ten new supplementary, speciality publications (e.g. Nature Materials). Since the late 2000s, dedicated editorial and current affairs columns are created weekly, and electoral endorsements are featured. The primary source of the journal remains, as established at its founding, research scientists; editing standards are primarily concerned with technical readability. Each issue also features articles that are of general interest to the scientific community, namely business, funding, scientific ethics, and research breakthroughs. There are also sections on books, arts, and short science fiction stories.The main research published in Nature consists mostly of papers (articles or letters) in lightly edited form. They are highly technical and dense, but, due to imposed text limits, they are typically summaries of larger work. Innovations or breakthroughs in any scientific or technological field are featured in the journal as either letters or news articles. The papers that have been published in this journal are internationally acclaimed for maintaining high research standards. Conversely, due to the journal's exposure, it has at various times been a subject of controversy for its handling of academic dishonesty, the scientific method, and news coverage. Fewer than 8% of submitted papers are accepted for publication. In 2007, Nature (together with Science) received the Prince of Asturias Award for Communications and Humanity.

Epidemiology is the study and analysis of the distribution (who, when, and where), patterns and determinants of health and disease conditions in a defined population, and application of this knowledge to prevent diseases.

It is a cornerstone of public health, and shapes policy decisions and evidence-based practice by identifying risk factors for disease and targets for preventive healthcare. Epidemiologists help with study design, collection, and statistical analysis of data, amend interpretation and dissemination of results (including peer review and occasional systematic review). Epidemiology has helped develop methodology used in clinical research, public health studies, and, to a lesser extent, basic research in the biological sciences.

The Intergovernmental Panel on Climate Change (IPCC) is an intergovernmental body of the United Nations. Its job is to "provide governments at all levels with scientific information that they can use to develop climate policies". The World Meteorological Organization (WMO) and the United Nations Environment Programme (UNEP) set up the IPCC in 1988. The United Nations endorsed the creation of the IPCC later that year. It has a secretariat in Geneva, Switzerland, hosted by the WMO. It has 195 member states who govern the IPCC. The member states elect a bureau of scientists to serve through an assessment cycle. A cycle is usually six to seven years. The bureau selects experts in their fields to prepare IPCC reports. There is a formal nomination process by governments and observer organizations to find these experts. The IPCC has three working groups and a task force, which carry out its scientific work.

The IPCC informs governments about the state of knowledge of climate change. It does this by examining all the relevant scientific literature on the subject. This includes the natural, economic and social impacts and risks. It also covers possible response options. The IPCC does not conduct its own original research. It aims to be objective and comprehensive. Thousands of scientists and other experts volunteer to review the publications. They compile key findings into "Assessment Reports" for policymakers and the general public; Experts have described this work as the biggest peer review process in the scientific community. The IPCC was the first of three global science policy panels to be established, followed by and IPBES (Intergovernmental Platform on Biodiversity and Ecosystem Services), established in 2012 and the Intergovernmental Science-Policy Panel on Chemicals, Waste and Pollution (ISPCWP) established in 2025.

Scientific literature encompasses a vast body of academic papers that spans various disciplines within the natural and social sciences. It primarily consists of academic papers that present original empirical research and theoretical contributions. These papers serve as essential sources of knowledge and are commonly referred to simply as "the literature" within specific research fields.

The process of academic publishing involves disseminating research findings to a wider audience. Researchers submit their work to reputable journals or conferences, where it undergoes rigorous evaluation by experts in the field. This evaluation, known as peer review, ensures the quality, validity, and reliability of the research before it becomes part of the scientific literature. Peer-reviewed publications contribute significantly to advancing our understanding of the world and shaping future research endeavors.

The Journal of Ecology is a bimonthly peer-reviewed scientific journal covering all aspects of the ecology of plants. It was established in 1913 and is published by Wiley-Blackwell on behalf of the British Ecological Society.

The journal publishes papers on plant ecology (including algae) in both terrestrial and aquatic ecosystems. In addition to population and community ecology, articles on biogeochemistry, ecosystems, microbial ecology, physiological plant ecology, climate change, molecular genetics, mycorrhizal ecology, and the interactions between plants and organisms such as animals or bacteria, are published regularly. Besides primary research articles, it publishes "Essay Reviews" and "Forum" articles. In 2008, the first papers in a new series called "Future Directions" were published. These short papers are intended to stimulate debate as to where a field within plant ecology is going, or needs to go.

COVIran Barekat (Persian: کووایران برکت) is a COVID-19 vaccine developed in Iran by Shifa Pharmed Industrial Group, a subsidiary of the Barkat Pharmaceutical Group. It is an inactivated virus-based vaccine. Iranian authorities have authorized its emergency use. This makes it the first locally developed COVID-19 vaccine to be approved for emergency use in the Middle East.

Officials in charge say they are in the process to publish the results of the clinical trials in a peer-reviewed journal. The interim results of the phases 1 and 2 trials showed 93.5% (95% CI, 88.4–99.6%) of the receivers of the vaccine have produced neutralizing antibodies against SARS-CoV-2. Those results have not been peer-reviewed and describe the immunogenicity of the vaccine and not its efficacy. On 3 March 2022, peer-reviewed results have been published in the Clinical Microbiology and Infection.

The Journal asiatique (French pronunciation: [ʒuʁnal azjatik]; full earlier title Journal Asiatique ou Recueil de Mémoires, d'Extraits et de Notices relatifs à l'Histoire, à la Philosophie, aux Langues et à la Littérature des Peuples Orientaux) is a biannual peer-reviewed academic journal established in 1822 by the Société Asiatique covering Asian studies. It publishes articles in French and several other European languages. Cited texts are presented in their original languages. Each issue also includes news of the Société Asiatique and its members, obituaries of notable Orientalists, critical reviews, and books received. The journal is published by Peeters Publishers on behalf of the Société Asiatique and the editor-in-chief is Jean-Marie Durand.

It is one of the oldest continuous French publications.