Mycelium in the context of Spore

In the study of the biological sciences, biocommunication is any specific type of communication within (intraspecific) or between (interspecific) species of plants, animals, fungi, protozoa and microorganisms. Communication means sign-mediated interactions following three levels of rules (syntactic, pragmatic and semantic). Signs in most cases are chemical molecules (semiochemicals), but also tactile, or as in animals also visual and auditive. Biocommunication of animals may include vocalizations (as between competing bird species), or pheromone production (as between various species of insects), chemical signals between plants and animals (as in tannin production used by vascular plants to warn away insects), and chemically mediated communication between plants and within plants.

Biocommunication of fungi demonstrates that mycelia communication integrates interspecific sign-mediated interactions between fungal organisms, soil bacteria and plant root cells without which plant nutrition could not be organized. Biocommunication of Ciliates identifies the various levels and motifs of communication in these unicellular eukaryotes. Biocommunication of Archaea represents key levels of sign-mediated interactions in the evolutionarily oldest akaryotes. Biocommunication of phages demonstrates that the most abundant living agents on this planet coordinate and organize by sign-mediated interactions. Biocommunication is the essential tool to coordinate behavior of various cell types of immune systems.

Nutrition is the biochemical and physiological process by which an organism uses food and water to support its life. The intake of these substances provides organisms with nutrients (divided into macro- and micro-) which can be metabolized to create energy and chemical structures; too much or too little of an essential nutrient can cause malnutrition. Nutritional science, the study of nutrition as a hard science, typically emphasizes human nutrition.

The type of organism determines what nutrients it needs and how it obtains them. Organisms obtain nutrients by consuming organic matter, consuming inorganic matter, absorbing light, or some combination of these. Some can produce nutrients internally by consuming basic elements, while others must consume other organisms to obtain pre-existing nutrients. All forms of life require carbon, energy, and water as well as various other molecules. Animals require complex nutrients such as carbohydrates, lipids, and proteins, obtaining them by consuming other organisms. Humans have developed agriculture and cooking to replace foraging and advance human nutrition. Plants acquire nutrients through the soil and the atmosphere. Fungi absorb nutrients around them by breaking them down and absorbing them through the mycelium.

A mold (US, PH) or mould (UK, CW) is one of the structures that certain fungi can form. The dust-like, colored appearance of molds is due to the formation of spores containing fungal secondary metabolites. The spores are the dispersal units of the fungi. Not all fungi form molds. Some fungi form mushrooms or ascomata; others grow as single cells, and are called microfungi (for example, yeasts).

A large and taxonomically diverse number of fungal species form molds. The growth of hyphae results in discoloration and a fuzzy appearance, especially on food. The network of these tubular branching hyphae, called a mycelium, is considered a single organism. The hyphae are generally transparent, so the mycelium appears like very fine, fluffy white threads over the surface. Cross-walls (septa) may delimit connected compartments along the hyphae, each containing one or multiple, genetically identical nuclei. The dusty texture of many molds is caused by profuse production of asexual spores (conidia) formed by differentiation at the ends of hyphae. The mode of formation and shape of these spores is traditionally used to classify molds. Many of these spores are colored, making the fungus much more obvious to the human eye at this stage in its life-cycle.

A hypha (from Ancient Greek ὑφή (huphḗ) 'web'; pl. hyphae) is a long, branching, filamentous structure of a fungus, oomycete, or actinobacterium. In most fungi, hyphae are the main mode of vegetative growth, and are collectively called a mycelium.

Dry rot is wood decay caused by one of several species of fungi that digest parts of wood which give it strength and stiffness. It was previously used to describe any decay of cured wood in ships and buildings by a fungus which resulted in a darkly colored deteriorated and cracked condition.

The life-cycle of dry rot can be broken down into four main stages. Dry rot begins as a microscopic spore which, in high enough concentrations, can resemble a fine orange dust. If the spores are subjected to sufficient moisture, they will germinate and begin to grow fine white strands known as hyphae. As the hyphae grow they will eventually form a large mass known as mycelium. The final stage is a fruiting body which pumps new spores out into the surrounding air.

Saprotrophic nutrition /sæprəˈtrɒfɪk, -proʊ-/ or lysotrophic nutrition is a process of chemoheterotrophic extracellular digestion involved in the processing of decayed (dead or waste) organic matter. It occurs in saprotrophs (organisms which feed on decaying organic matter), and is most often associated with fungi (e.g. Mucor) and with soil bacteria. Saprotrophic microscopic fungi are sometimes called saprobes. Saprotrophic plants or bacterial flora are called saprophytes (sapro- 'rotten material' + -phyte 'plant'), although it is now believed that all plants previously thought to be saprotrophic are in fact parasites of microscopic fungi or of other plants. In fungi, the saprotrophic process is most often facilitated through the active transport of such materials through endocytosis within the internal mycelium and its constituent hyphae.

Various word roots relating to decayed matter (detritus, sapro-, lyso-), to eating and nutrition (-vore, -phage, -troph), and to plants or life forms (-phyte, -obe) produce various terms, such as detritivore, detritophage, saprotroph, saprophyte, saprophage, and saprobe; their meanings overlap, although technical distinctions (based on physiologic mechanisms) narrow the senses. For example, biologists can make usage distinctions based on macroscopic swallowing of detritus (as in earthworms) versus microscopic lysis of detritus (as with mushrooms).

Armillaria mellea, commonly known as honey fungus, is an edible basidiomycete fungus in the genus Armillaria. It is a plant pathogen and part of a cryptic species complex of closely related and morphologically similar species. It causes Armillaria root rot in many plant species and produces mushrooms around the base of trees it has infected. The symptoms of infection appear in the crowns of infected trees as discoloured foliage, reduced growth, dieback of the branches and death. The mycelium is capable of producing light via bioluminescence.

The mushroom is widely distributed in temperate regions of the Northern Hemisphere. It typically grows on hardwoods but may be found around and on other living and dead wood or in open areas.

A monokaryon is a fungal mycelium or hypha in which each cell contains a single nucleus. It also refers to a mononuclear spore or cell of a fungus that produces a dikaryon in its life cycle.

A clonal colony or genet is a group of genetically identical individuals, such as plants, fungi, or bacteria, that have grown in a given location, all originating vegetatively, not sexually, from a single ancestor. In plants, an individual in such a population is referred to as a ramet. In fungi, "individuals" typically refers to the visible fruiting bodies or mushrooms that develop from a common mycelium which, although spread over a large area, is otherwise hidden in the soil. Clonal colonies are common in many plant species. Although many plants reproduce sexually through the production of seed, reproduction occurs by underground stolons or rhizomes in some plants. Above ground, these plants most often appear to be distinct individuals, but underground they remain interconnected and are all clones of the same plant. However, it is not always easy to recognize a clonal colony especially if it spreads underground and is also sexually reproducing.

A basidium (pl.: basidia) is a microscopic spore-producing structure found on the hymenophore of reproductive bodies of basidiomycete fungi. The presence of basidia is one of the main characteristic features of the group. These bodies are also called tertiary mycelia, which are highly coiled versions of secondary mycelia. A basidium usually bears four sexual spores called basidiospores. Occasionally the number may be two or even eight. Each reproductive spore is produced at the tip of a narrow prong or horn called a sterigma (pl. sterigmata), and is forcefully expelled at full growth.

The word basidium literally means "little pedestal". This is the way the basidium supports the spores. However, some biologists suggest that the structure looks more like a club. A partially grown basidium is known as a basidiole.

The Actinomycetota (previously known as "Actinobacteria") are a diverse phylum of Gram-positive bacteria with high GC content. They can be terrestrial or aquatic. They are of great importance to land flora because of their contributions to soil systems. In soil, they help decompose organic matter of dead organisms so the molecules can be taken up anew by plants. While this role is also played by fungi, actinomycetota are much smaller and likely do not occupy the same ecological niche. In this role, the colonies often grow extensive mycelia, as fungi do, and the name of an important order of the phylum, Actinomycetales (the actinomycetes), reflects that they were long believed to be fungi. Some soil actinomycetota (such as Frankia) live symbiotically with the plants whose roots pervade the soil, fixing nitrogen for the plants in exchange for access to some of the plant's saccharides. Other species, such as many members of the genus Mycobacterium, are important pathogens.

Beyond the great interest in Actinomycetota for their soil role, much is yet to be learned about them. Although currently understood primarily as soil bacteria, they might be more abundant in fresh waters. Actinomycetota is one of the dominant bacterial phyla and contains one of the largest of bacterial genera: Streptomyces. Streptomyces and other actinomycetota are major contributors to biological buffering of soils. They are also the source of many antibiotics.

An ectomycorrhiza (from Ancient Greek ἐκτός (ektós) 'outside' μύκης (múkēs) 'fungus' and ῥίζα (rhíza) 'root'; abbreviated EcM; pl. ectomycorrhizae or ectomycorrhizas) is a form of symbiotic relationship that occurs between a fungal symbiont, or mycobiont, and the roots of various plant species. The mycobiont is often from the phyla Basidiomycota and Ascomycota, and more rarely from the Zygomycota.

Ectomycorrhizae form on the roots of around 2% of plant species, usually woody plants, including species from the birch, dipterocarp, myrtle, beech, willow, pine and rose families. Research on ectomycorrhizae is increasingly important in areas such as ecosystem management and restoration, forestry, and agriculture.