Luciferin (from Latin lucifer 'light-bearer') is a generic term for the light-emitting compound found in organisms that generate bioluminescence. Luciferins typically undergo an enzyme-catalyzed reaction with molecular oxygen. The resulting transformation, which usually involves breaking off a molecular fragment, produces an excited state intermediate that emits light upon decaying to its ground state. The term may refer to molecules that are substrates for both luciferases and photoproteins.Luciferins and luciferases are usually specific to particular species or taxonomic groups.
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Luciferin in the context of Bioluminescence
Bioluminescence is the emission of light during a chemiluminescence reaction by living organisms. Bioluminescence occurs in multifarious organisms ranging from marine vertebrates and invertebrates, as well as in some fungi, microorganisms including some bioluminescent bacteria, dinoflagellates and terrestrial arthropods such as fireflies. In some animals, the light is bacteriogenic, produced by symbiotic bacteria such as those from the genus Vibrio; in others, it is autogenic, produced by the animals themselves.
In most cases, the principal chemical reaction in bioluminescence involves the reaction of a substrate called luciferin and an enzyme, called luciferase. Because these are generic names, luciferins and luciferases are often distinguished by the species or group, e.g. firefly luciferin or cypridina luciferin. In all characterized cases, the enzyme catalyzes the oxidation of the luciferin resulting in excited state oxyluciferin, which is the light emitter of the reaction. Upon their decay to the ground state they emit visible light. In all known cases of bioluminescence the production of the excited state molecules involves the decomposition of organic peroxides.
Luciferin in the context of Luciferase
Luciferase is a generic term for the class of oxidative enzymes that produce bioluminescence, and is usually distinguished from a photoprotein. The name was first used by Raphaël Dubois who invented the words luciferin and luciferase, for the substrate and enzyme, respectively. Both words are derived from the Latin word lucifer, meaning "lightbearer", which in turn is derived from the Latin words for "light" (lux) and "to bring or carry" (ferre).Luciferases are widely used in biotechnology, for bioluminescence imaging microscopy and as reporter genes, for many of the same applications as fluorescent proteins. However, unlike fluorescent proteins, luciferases do not require an external light source, but do require addition of luciferin, the consumable substrate.
Luciferin in the context of Firefly luciferin
Firefly luciferin (also known as beetle luciferin) is the luciferin, precursor of the light-emitting compound, used for the firefly (Lampyridae), railroad worm (Phengodidae), starworm (Rhagophthalmidae), and click-beetle (Pyrophorini) bioluminescent systems. It is the substrate of firefly luciferase (EC 1.13.12.7), which is responsible for the characteristic light emission of many firefly and other insect species in the visible spectra ranging from 530 until 630 nm.
As with other luciferins, oxygen is essential for the luminescence mechanism, which involves the decomposition of a cyclic peroxide to produce excited-state molecules capable of emitting light as they relax to the ground state. Additionally, it has been found that adenosine triphosphate (ATP) and magnesium are required for light emission.
Luciferin in the context of Vargulin
Vargulin, also called Cypridinid luciferin, Cypridina luciferin, or Vargula luciferin, is the luciferin found in the ostracod Cypridina hilgendorfii, also named Vargula hilgendorfii. These bottom dwelling ostracods emit a light stream into water when disturbed presumably to deter predation. Vargulin is also used by the midshipman fish, Porichthys.
Luciferin in the context of Tomopteris
The gossamer worm (scientific name Tomopteris, Neo-Latin from Greek meaning "a cut" + "wing" but taken to mean "fin") is a genus of marine planktonic polychaetes. All described species are known to be holoplanktic, meaning that they spend their entire life cycles in the water column.
E. Newton Harvey had noted the unusual yellow bioluminescence occurring from the parapodia. There are very few known marine animals that exhibit yellow luminescence. Many species of plankton are known to display this property of bioluminescence. The mechanisms of this process are not well understood; only that they do not use any of the currently known luciferins. If disturbed, a few species are known to release bioluminescent particles from their parapodia, though possibly all species of Tomopteris do this. It is thought that this mode is to distract predators, analogous to chaff or flares dispensed from military aircraft during evasive maneuvers.