Clade in the context of Apini

A honey bee (also spelled honeybee) is a eusocial flying insect from the genus Apis of the largest bee family, Apidae. Honey bees are known for their construction of perennial nests within cavities (i.e. beehives) containing hexagonal cells made of secreted wax, their large colony sizes, and their routine regurgitation of digested carbohydrates as surplus food storage in the form of honey, the lattermost of which distinguishes their hives as a prized foraging target of many mellivorous animals including honey badgers, bears and human hunter-gatherers.

Although honey bees represent only a small fraction of the roughly 20,000 known species of bees, they are the bee clade most familiar to humans and are also the most valuable beneficial insects to agriculture and horticulture. The best-known honey bee species is the western honey bee (Apis mellifera), which was domesticated and farmed (i.e. beekeeping) for honey production and crop pollination. The only other domesticated species is the eastern honey bee (Apis cerana), which are raised in South, Southeast and East Asia.

Algae (/ˈældʒiː/ AL-jee, UK also /ˈælɡiː/ AL-ghee; sg.: alga /ˈælɡə/ AL-gə) is an informal term for any organisms of a large and diverse group of photosynthetic organisms that are not land plants, and includes species from multiple distinct clades. Such organisms range from unicellular microalgae, such as cyanobacteria, Chlorella, and diatoms, to multicellular macroalgae such as kelp or brown algae which may grow up to 50 metres (160 ft) in length. Most algae are aquatic organisms and lack many of the distinct cell and tissue types, such as stomata, xylem, and phloem that are found in land plants. The largest and most complex marine algae are called seaweeds. In contrast, the most complex freshwater forms are the Charophyta, a division of green algae which includes, for example, Spirogyra and stoneworts. Algae that are carried passively by water are plankton, specifically phytoplankton.

Algae constitute a polyphyletic group because they do not include a common ancestor, and although eukaryotic algae with chlorophyll-bearing plastids seem to have a single origin (from symbiogenesis with cyanobacteria), they were acquired in different ways. Green algae are a prominent example of algae that have primary chloroplasts derived from endosymbiont cyanobacteria. Diatoms and brown algae are examples of algae with secondary chloroplasts derived from endosymbiotic red algae, which they acquired via phagocytosis. Algae exhibit a wide range of reproductive strategies, from simple asexual cell division to complex forms of sexual reproduction via spores.

An evolutionary radiation is an increase in taxonomic diversity that is caused by elevated rates of speciation, that may or may not be associated with an increase in morphological disparity. A significantly large and diverse radiation within a relatively short geologic time scale (e.g. a period or epoch) is often referred to as an explosion. Radiations may affect one clade or many, and be rapid or gradual; where they are rapid, and driven by a single lineage's adaptation to their environment, they are termed adaptive radiations.

Eumetazoa (from Ancient Greek εὖ (eû) 'well' μετά (metá) 'after' and ζῷον (zôion) 'animal'), also known as Epitheliozoa or Histozoa, is a proposed basal animal subkingdom as a sister group of Porifera (sponges). The basal eumetazoan clades are the Ctenophora and the ParaHoxozoa. Placozoa is now also seen as a eumetazoan in the ParaHoxozoa. The competing hypothesis is the Myriazoa clade. The subkingdom Parazoa and Agnotozoa are the other taxa, and agnotozoa may be fake or even nonexistent at studies. Parazoa or Agnotozoa are a main sister group to eumetazoans, forming clade Blastozoa/Diploblastozoa. Alternatively,Parazoa was considered as a sister group to Agnotozoa (now considered polyphyletic).Several other extinct or obscure life forms, such as Iotuba and Thectardis, appear to have emerged in the group. Characteristics of eumetazoans include true tissues organized into germ layers, the presence of neurons and muscles, and an embryo that goes through a gastrula stage.

Some phylogenists once speculated the sponges and eumetazoans evolved separately from different single-celled organisms, which would have meant that the animal kingdom does not form a clade (a complete grouping of all organisms descended from a common ancestor). However, genetic studies and some morphological characteristics, like the common presence of choanocytes, now unanimously support a common origin.

The green algae (sg.: green alga) are a group of chlorophyll-containing autotrophic algae consisting of the phylum Prasinodermophyta and its unnamed sister group that contains the Chlorophyta and Charophyta/Streptophyta. The land plants (Embryophyta) have emerged deep within the charophytes as a sister of the Zygnematophyceae. Since the realization that the Embryophyta emerged within the green algae, some authors are starting to include them. The completed clade that includes both green algae and embryophytes is monophyletic and is referred to as the clade Viridiplantae and as the kingdom Plantae. The green algae include unicellular and colonial flagellates, most with two flagella per cell, as well as various colonial, coccoid (spherical), and filamentous forms, and macroscopic, multicellular seaweeds. There are about 22,000 species of green algae, many of which live most of their lives as single cells, while other species form coenobia (colonies), long filaments, or highly differentiated macroscopic seaweeds.

A few other organisms rely on green algae to conduct photosynthesis for them. The chloroplasts in dinoflagellates of the genus Lepidodinium, euglenids and chlorarachniophytes were acquired from ingested endosymbiont green algae, and in the latter retain a nucleomorph (vestigial nucleus). Green algae are also found symbiotically in the ciliate Paramecium, and in Hydra viridissima and in flatworms. Some species of green algae, particularly of genera Trebouxia of the class Trebouxiophyceae and Trentepohlia (class Ulvophyceae), can be found in symbiotic associations with fungi to form lichens. In general, the fungal species that partner in lichens cannot live on their own, while the algal species is often found living in nature without the fungus. Trentepohlia is a filamentous green alga that can live independently on humid soil, rocks or tree bark or form the photosymbiont in lichens of the family Graphidaceae. Also the macroalga Prasiola calophylla (Trebouxiophyceae) is terrestrial, andPrasiola crispa, which live in the supralittoral zone, is terrestrial and can in the Antarctic form large carpets on humid soil, especially near bird colonies.

Plants are the eukaryotes that comprise the kingdom Plantae; they are predominantly photosynthetic. This means that they obtain their energy from sunlight, using chloroplasts derived from endosymbiosis with cyanobacteria to produce sugars from carbon dioxide and water, using the green pigment chlorophyll. Exceptions are parasitic plants that have lost the genes for chlorophyll and photosynthesis, and obtain their energy from other plants or fungi. Most plants are multicellular, except for some green algae.

Historically, as in Aristotle's biology, the plant kingdom encompassed all living things that were not animals, and included algae and fungi. Definitions have narrowed since then; current definitions exclude fungi and some of the algae. By the definition used in this article, plants form the clade Viridiplantae (green plants), which consists of the green algae and the embryophytes or land plants (hornworts, liverworts, mosses, lycophytes, ferns, conifers and other gymnosperms, and flowering plants). A definition based on genomes includes the Viridiplantae, along with the red algae and the glaucophytes, in the clade Archaeplastida.

Animals are multicellular, eukaryotic organisms comprising the biological kingdom Animalia (/ˌænɪˈmeɪliə/). With few exceptions, animals consume organic material, breathe oxygen, have myocytes and are able to move, can reproduce sexually, and grow from a hollow sphere of cells, the blastula, during embryonic development. Animals form a clade, meaning that they arose from a single common ancestor. Over 1.5 million living animal species have been described, of which around 1.05 million are insects, over 85,000 are molluscs, and around 65,000 are vertebrates. It has been estimated there are as many as 7.77 million animal species on Earth. Animal body lengths range from 8.5 μm (0.00033 in) to 33.6 m (110 ft). They have complex ecologies and interactions with each other and their environments, forming intricate food webs. The scientific study of animals is known as zoology, and the study of animal behaviour is known as ethology.

The animal kingdom is divided into five major clades, namely Porifera, Ctenophora, Placozoa, Cnidaria and Bilateria. Most living animal species belong to the clade Bilateria, a highly proliferative clade whose members have a bilaterally symmetric and significantly cephalised body plan, and the vast majority of bilaterians belong to two large clades: the protostomes, which includes organisms such as arthropods, molluscs, flatworms, annelids and nematodes; and the deuterostomes, which include echinoderms, hemichordates and chordates, the latter of which contains the vertebrates. The much smaller basal phylum Xenacoelomorpha have an uncertain position within Bilateria.

A protist (/ˈproʊtɪst/ PROH-tist) or protoctist is any eukaryotic organism that is not an animal, land plant, or fungus. Protists do not form a natural group, or clade, but are a paraphyletic grouping of all descendants of the last eukaryotic common ancestor excluding land plants, animals, and fungi.

Protists were historically regarded as a separate taxonomic kingdom known as Protista or Protoctista. With the advent of phylogenetic analysis and electron microscopy studies, the use of Protista as a formal taxon was gradually abandoned. In modern classifications, protists are spread across several eukaryotic clades called supergroups, such as Archaeplastida (photoautotrophs that includes land plants), SAR, Obazoa (which includes fungi and animals), Amoebozoa and "Excavata".

There are hundreds of local Chinese language varieties forming a branch of the Sino-Tibetan language family, many of which are not mutually intelligible. Variation is particularly strong in the more mountainous southeast part of mainland China. The varieties are typically classified into several groups: Mandarin, Wu, Min, Xiang, Gan, Jin, Hakka and Yue, though some varieties remain unclassified. These groups are neither clades nor individual languages defined by mutual intelligibility, but reflect common phonological developments from Middle Chinese.

Chinese varieties have the greatest differences in their phonology, and to a lesser extent in vocabulary and syntax. Southern varieties tend to have fewer initial consonants than northern and central varieties, but more often preserve the Middle Chinese final consonants. All have phonemic tones, with northern varieties tending to have fewer distinctions than southern ones. Many have tone sandhi, with the most complex patterns in the coastal area from Zhejiang to eastern Guangdong.

Mites are small arachnids (eight-legged arthropods) of two large orders, the Acariformes and the Parasitiformes, which were historically grouped together in the subclass Acari. However, most recent genetic analyses do not recover the two as each other's closest relative within Arachnida, rendering the group invalid as a clade. Most mites are tiny, less than 1 mm (0.04 in) in length, and have a simple, unsegmented body plan. The small size of most species makes them easily overlooked; some species live in water, many live in soil as decomposers, others live on plants, sometimes creating galls, while others are predators or parasites. This last type includes the commercially destructive Varroa parasite of honey bees, as well as scabies mites of humans. Most species are harmless to humans, but a few are associated with allergies or may transmit diseases.

The scientific discipline devoted to the study of mites is called acarology.

The nematodes (/ˈnɛmətoʊdz/ NEM-ə-tohdz or NEEM-; Ancient Greek: Νηματώδη; Latin: Nematoda), roundworms or eelworms constitute the phylum Nematoda. Species in the phylum inhabit a broad range of environments. Most species are free-living, feeding on microorganisms, but many are parasitic. Parasitic worms (helminths) are the cause of soil-transmitted helminthiases.

They are classified along with arthropods, tardigrades and other moulting animals in the clade Ecdysozoa. Unlike the flatworms, nematodes have a tubular digestive system, with openings at both ends. Like tardigrades, they have a reduced number of Hox genes, but their sister phylum Nematomorpha has kept the ancestral protostome Hox genotype, which shows that the reduction has occurred within the nematode phylum.

Pinnipeds (pronounced /ˈpɪnɪˌpɛdz/), commonly known as seals, are a widely distributed and diverse clade of carnivorous, fin-footed, semiaquatic, mostly marine mammals. They comprise the extant families Odobenidae (whose only living member is the walrus), Otariidae (the eared seals: sea lions and fur seals), and Phocidae (the earless seals, or true seals), with 34 extant species and more than 50 extinct species described from fossils. While seals were historically thought to have descended from two ancestral lines, molecular evidence supports them as a monophyletic group (descended from one ancestor). Pinnipeds belong to the suborder Caniformia of the order Carnivora; their closest living relatives are musteloids (weasels, raccoons, skunks and red pandas), having diverged about 50 million years ago.

Seals range in size from the 1 m (3 ft 3 in) and 45 kg (100 lb) Baikal seal to the 5 m (16 ft) and 3,200 kg (7,100 lb) southern elephant seal. Several species exhibit sexual dimorphism. They have streamlined bodies and four limbs that are modified into flippers. Though not as fast in the water as dolphins, seals are more flexible and agile. Otariids primarily use their front limbs to propel themselves through the water, while phocids and walruses primarily use their hind limbs for this purpose. Otariids and walruses have hind limbs that can be pulled under the body and used as legs on land. By comparison, terrestrial locomotion by phocids is more cumbersome. Otariids have visible external ears, while phocids and walruses lack these. Pinnipeds have well-developed senses—their eyesight and hearing are adapted for both air and water, and they have an advanced tactile system in their whiskers or vibrissae. Some species are well adapted for diving to great depths. They have a layer of fat, or blubber, under the skin to keep warm in cold water, and, other than the walrus, all species are covered in fur.

The australopithecines (/ɒˈstrəloʊˈpɪθəsiːnz, ˈɔːstreɪloʊ-/), formally Australopithecina or Hominina, are generally any species in the related genera of Australopithecus and Paranthropus. It may also include members of Kenyanthropus, Ardipithecus, and Praeanthropus. The term comes from a former classification as members of a distinct subfamily, the Australopithecinae. They are classified within the Australopithecina subtribe of the Hominini tribe. These related species are sometimes collectively termed australopithecines, australopiths, or homininians. They are the extinct, close relatives of modern humans and, together with the extant genus Homo, comprise the human clade. There is no general agreement to whether australopithecines are closest relatives of modern humans, as it has been argued that they are more closely related to extant African apes. Members of the human clade, i.e. the Hominini after the split from the chimpanzees, are called Hominina (see Hominidae; terms "hominids" and hominins).

While none of the groups normally directly assigned to this group survived, the australopithecines do not appear to be literally extinct (in the sense of having no living descendants) as the genera Kenyanthropus, Paranthropus, and Homo probably emerged as sisters of a late Australopithecus species such as A. africanus and/or A. sediba.

Dinosaurs are a diverse group of reptiles of the clade Dinosauria. They first appeared during the Triassic period, between 243 and 233.23 million years ago (mya), although the exact origin and timing of the evolution of dinosaurs is a subject of active research. They became the dominant terrestrial vertebrates after the Triassic–Jurassic extinction event 201.3 mya and their dominance continued throughout the Jurassic and Cretaceous periods. The fossil record shows that birds are feathered dinosaurs, having evolved from earlier theropods during the Late Jurassic epoch, and are the only dinosaur lineage known to have survived the Cretaceous–Paleogene extinction event approximately 66 mya. Dinosaurs can therefore be divided into avian dinosaurs—birds—and the extinct non-avian dinosaurs, which are all dinosaurs other than birds.

Dinosaurs are varied from taxonomic, morphological and ecological standpoints. Birds, at over 11,000 living species, are among the most diverse groups of vertebrates. Using fossil evidence, paleontologists have identified over 900 distinct genera and more than 1,000 different species of non-avian dinosaurs. Dinosaurs are represented on every continent by both extant species (birds) and fossil remains. Through most of the 20th century, before birds were recognized as dinosaurs, most of the scientific community believed dinosaurs to have been sluggish and cold-blooded. Most research conducted since the 1970s, however, has indicated that dinosaurs were active animals with elevated metabolisms and numerous adaptations for social interaction. Some were herbivorous, others carnivorous. Evidence suggests that all dinosaurs were egg-laying, and that nest-building was a trait shared by many dinosaurs, both avian and non-avian.

Graeco-Aryan, or Graeco-Armeno-Aryan, is a hypothetical clade within the Indo-European family that would be the ancestor of Hellenic, Armenian, and the Indo-Iranian languages, which spans Southern Europe, Armenian highlands and Southern Asian regions of Eurasia.

The Graeco-Armeno-Aryan group supposedly branched off from the parent Indo-European stem by the mid-3rd millennium BC.

Cladistics (/kləˈdɪstɪks/ klə-DIST-iks; from Ancient Greek κλάδος kládos 'branch') is an approach to biological classification in which organisms are categorized in groups ("clades") based on hypotheses of most recent common ancestry. The evidence for hypothesized relationships is typically shared derived characteristics (synapomorphies) that are not present in more distant groups and ancestors. However, from an empirical perspective, common ancestors are inferences based on a cladistic hypothesis of relationships of taxa whose character states can be observed. Theoretically, a last common ancestor and all its descendants constitute a (minimal) clade. Importantly, all descendants stay in their overarching ancestral clade. For example, if the terms worms or fishes were used within a strict cladistic framework, these terms would include humans. Many of these terms are normally used paraphyletically, outside of cladistics, e.g. as a 'grade', which are fruitless to precisely delineate, especially when including extinct species. Radiation results in the generation of new subclades by bifurcation, but in practice sexual hybridization may blur very closely related groupings.

As a hypothesis, a clade can be rejected only if some groupings were explicitly excluded. It may then be found that the excluded group did actually descend from the last common ancestor of the group, and thus emerged within the group. ("Evolved from" is misleading, because in cladistics all descendants stay in the ancestral group). To keep only valid clades, upon finding that the group is paraphyletic this way, either such excluded groups should be granted to the clade, or the group should be abolished.

Flowering plants are plants that bear flowers and fruits, and form the clade Angiospermae (/ˌændʒiəˈspɜːrmiː/). The term angiosperm is derived from the Greek words ἀγγεῖον (angeion; 'container, vessel') and σπέρμα (sperma; 'seed'), meaning that the seeds are enclosed within a fruit. The group was formerly called Magnoliophyta.

Angiosperms are by far the most diverse group of land plants with 64 orders, 416 families, approximately 13,000 known genera and 300,000 known species. They include all forbs (flowering plants without a woody stem), grasses and grass-like plants, a vast majority of broad-leaved trees, shrubs and vines, and most aquatic plants. Angiosperms are distinguished from the other major seed plant clade, the gymnosperms, by having flowers, xylem consisting of vessel elements instead of tracheids, endosperm within their seeds, and fruits that completely envelop the seeds. The ancestors of flowering plants diverged from the common ancestor of all living gymnosperms before the end of the Carboniferous, over 300 million years ago. In the Cretaceous, angiosperms diversified explosively, becoming the dominant group of plants across the planet.

Linnaean taxonomy can mean either of two related concepts:

1. The particular form of biological classification (taxonomy) set up by Carl Linnaeus, as set forth in his Systema Naturae (1735) and subsequent works. In the taxonomy of Linnaeus there are three kingdoms, divided into classes, and the classes divided into lower ranks in a hierarchical order.
2. A term for rank-based classification of organisms, in general. That is, taxonomy in the traditional sense of the word: rank-based scientific classification. This term is especially used as opposed to cladistic systematics, which groups organisms into clades. It is attributed to Linnaeus, although he neither invented the concept of ranked classification (it goes back to Plato and Aristotle) nor gave it its present form. In fact, it does not have an exact present form, as "Linnaean taxonomy" as such does not really exist: it is a collective (abstracting) term for what actually are several separate fields, which use similar approaches.

Linnaean name also has two meanings, depending on the context: it may either refer to a formal name given by Linnaeus (personally), such as Giraffa camelopardalis Linnaeus, 1758; or a formal name in the accepted nomenclature (as opposed to a modernistic clade name).