Thiobacillus in the context of Annwoodia


Thiobacillus in the context of Annwoodia

⭐ Core Definition: Thiobacillus

Thiobacillus is a genus of Gram-negative Betaproteobacteria. Thiobacillus thioparus is the type species of the genus, and the type strain thereof is the Starkey strain, isolated by Robert Starkey in the 1930s from a field at Rutgers University in the United States of America. While over 30 "species" have been named in this genus since it was defined by Martinus Beijerinck in 1904, (the first strain was observed by the biological oceanographer Alexander Nathansohn in 1902 - likely what we would now call Halothiobacillus neapolitanus), most names were never validly or effectively published. The remainder were either reclassified into Paracoccus, Starkeya (both in the Alphaproteobacteria); Sulfuriferula, Annwoodia, Thiomonas (in the Betaproteobacteria); Halothiobacillus, Guyparkeria (in the Gammaproteobacteria), or Thermithiobacillus or Acidithiobacillus (in the Acidithiobacillia). The very loosely defined "species" Thiobacillus trautweinii was where sulfur oxidising heterotrophs and chemolithoheterotrophs were assigned in the 1910-1960s era, most of which were probably Pseudomonas species. Many species named in this genus were never deposited in service collections and have been lost.

All species are obligate autotrophs (using the transaldolase form of the Calvin-Benson-Bassham cycle) using elementary sulfur, thiosulfate, or polythionates as energy sources - the former Thiobacillus aquaesulis can grow weakly on complex media as a heterotroph, but has been reclassified to Annwoodia aquaesulis. Some strains (E6 and Tk-m) of the type species Thiobacillus thioparus can use the sulfur from dimethylsulfide, dimethyldisulfide, or carbon disulfide to support autotrophic growth - they oxidise the carbon from these species into carbon dioxide and assimilate it. Sulfur oxidation is achieved via the Kelly-Trudinger pathway.

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Thiobacillus in the context of Acidithiobacillia

Acidithiobacillia is a class of the phylum Pseudomonadota ("Proteobacteria"). Its type order, the Acidithiobacillales, was formerly classified within the Gammaproteobacteria, and comprises two families of sulfur-oxidising autotrophs, the Acidithiobacillaceae and the Thermithiobacillaceae, which in turn include the genera Acidithiobacillus and Thermithiobacillus. The Acidithiobacillales are an order of bacteria within the class Acidithiobacillia and comprises the genera Acidithiobacillus and Thermithiobacillus. Originally, both were included in the genus Thiobacillus, but they are not related to the type species, which belongs to the Betaproteobacteria.

Acidithiobacilia is part of the acidophilic bacteria family. Acidithiobacilia's metabolic activity is important because it is relied on for an approach for metal recovery from ores, called microorganism-mediated biohydrometallurgy. Acidithiobacilia and family of bacteria are active players in the sulfur and iron biogeochemical cycles in extremely acidic environments and drivers of the leaching of mineral ores contributing to acid rock/mine drainage and industrial bioleaching.

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Thiobacillus in the context of Hydrogenophilaceae

The Hydrogenophilaceae are a family of the class Hydrogenophilalia in the phylum Pseudomonadota ("Proteobacteria"), with two genera – Hydrogenophilus and Tepidiphilus. Like all Pseudomonadota, they are Gram-negative. All known species are thermophilic, growing around 50 °C, and use molecular hydrogen or organic molecules as their source of electrons to support growth; some species are autotrophs.

The genus Thiobacillus was previously considered to be a member in this family but was reclassified into the order Nitrosomonadales at the same time that the Hydrogenophilales were removed from the Betaproteobacteria to form the class Hydrogenophilalia.

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Thiobacillus in the context of Thermithiobacillaceae

Thermithiobacillus is a genus of nonsporeforming, rod-shaped, Gram-negative bacteria. The name derives from the Latin thermae, for warm baths, and the Classical Greek θείος, theios for sulfur. The type species of this genus was previously assigned to the genus Thiobacillus, but it was reclassified on the basis of 16S rRNA analysis in 2000, creating this genus.

A phylogenetic analysis, using 98 protein families confirmed this reassignment. This chemolithoautotrophic genus is obligately aerobic and moderately thermophilic (43-45 °C). The type species is Thermithiobacillus tepidarius. A second species, Thermithiobacillus plumbiphilus, was published in 2016.

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