Taxonomy (biology) in the context of "Virus classification"

Biogeography is the study of the distribution of species and ecosystems in geographic space and through geological time. Organisms and biological communities often vary in a regular fashion along geographic gradients of latitude, elevation, isolation and habitat area. Phytogeography is the branch of biogeography that studies the distribution of plants, Zoogeography is the branch that studies distribution of animals, while Mycogeography is the branch that studies distribution of fungi, such as mushrooms.

Knowledge of spatial variation in the numbers and types of organisms is as vital to us today as it was to our early human ancestors, as we adapt to heterogeneous but geographically predictable environments. Biogeography is an integrative field of inquiry that unites concepts and information from ecology, evolutionary biology, taxonomy, geology, physical geography, palaeontology, and climatology.

The Natural History Museum in London is a museum that exhibits a vast range of specimens from various segments of natural history. It is one of three major museums on Exhibition Road in South Kensington, the others being the Science Museum and the Victoria and Albert Museum. The Natural History Museum's main frontage, however, is on Cromwell Road.

The museum is home to life and earth science specimens comprising some 80 million items within five main collections: botany, entomology, mineralogy, palaeontology and zoology. The museum is a centre of research specialising in taxonomy, identification and conservation. Given the age of the institution, many of the collections have great historical as well as scientific value, such as specimens collected by Charles Darwin. The museum is particularly famous for its exhibition of dinosaur skeletons and ornate architecture—sometimes dubbed a cathedral of nature—both exemplified by the large Diplodocus cast that dominated the vaulted central hall before it was replaced in 2017 with the skeleton of a blue whale hanging from the ceiling. The Natural History Museum Library contains an extensive collection of books, journals, manuscripts, and artwork linked to the work and research of the scientific departments; access to the library is by appointment only. The museum is recognised as the pre-eminent centre of natural history and research of related fields in the world.

A species (pl. species) is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. It can be defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring, typically by sexual reproduction. Other ways of defining species include their karyotype, DNA sequence, morphology, behaviour, or ecological niche. In addition, palaeontologists use the concept of the chronospecies since fossil reproduction cannot be examined. The most recent rigorous estimate for the total number of species of eukaryotes is between 8 and 8.7 million. About 14% of these had been described by 2011. All species (except viruses) are given a two-part name, a "binomen". The first part of a binomen is the name of a genus to which the species belongs. The second part is called the specific name or the specific epithet (in botanical nomenclature, also sometimes in zoological nomenclature). For example, Boa constrictor is one of the species of the genus Boa, with constrictor being the specific name.

While the definitions given above may seem adequate at first glance, when looked at more closely they represent problematic species concepts. For example, the boundaries between closely related species become unclear with hybridisation, in a species complex of hundreds of similar microspecies, and in a ring species. Also, among organisms that reproduce only asexually, the concept of a reproductive species breaks down, and each clonal lineage is potentially a microspecies. Although none of these are entirely satisfactory definitions, and while the concept of species may not be a perfect model of life, it is still a useful tool to scientists and conservationists for studying life on Earth, regardless of the theoretical difficulties. If species were fixed and distinct from one another, there would be no problem, but evolutionary processes cause species to change. This obliges taxonomists to decide, for example, when enough change has occurred to declare that a fossil lineage should be divided into multiple chronospecies, or when populations have diverged to have enough distinct character states to be described as cladistic species.

Family (Latin: familia, pl.: familiae) is one of the eight major hierarchical taxonomic ranks in Linnaean taxonomy. It is classified between order and genus. A family may be divided into subfamilies, which are intermediate ranks between the ranks of family and genus. The official family names are Latin in origin; however, popular names are often used: for example, walnut trees and hickory trees belong to the family Juglandaceae, but that family is commonly referred to as the "walnut family".

The delineation of what constitutes a family—or whether a described family should be acknowledged—is established and decided upon by active taxonomists. There are not strict regulations for outlining or acknowledging a family, yet in the realm of plants, these classifications often rely on both the vegetative and reproductive characteristics of plant species. Taxonomists frequently hold varying perspectives on these descriptions, leading to a lack of widespread consensus within the scientific community for extended periods.

Oleaceae (/ˌoʊliˈeɪsi.iː, -ˌaɪ/), also known as the olive family or sometimes the lilac family, is a taxonomic family of flowering shrubs, trees, and a few lianas in the order Lamiales. It presently comprises 28 genera, one of which is recently extinct. The extant genera include Cartrema, which was resurrected in 2012. The number of species in the Oleaceae is variously estimated in a wide range around 700. The flowers are often numerous and highly odoriferous. The family has a subcosmopolitan distribution, ranging from the subarctic to the southernmost parts of Africa, Australia, and South America. Notable members include olive, ash, jasmine, and several popular ornamental plants including privet, forsythia, fringetrees, and lilac.

In biological classification, subspecies (pl.: subspecies) is a rank below species, used for populations that live in different areas and vary in size, shape, or other physical characteristics (morphology), but that can successfully interbreed. Not all species have subspecies, but for those that do there must be at least two. Subspecies is abbreviated as subsp. or ssp. and the singular and plural forms are the same ("the subspecies is" or "the subspecies are").

In zoology, under the International Code of Zoological Nomenclature, the subspecies is the only taxonomic rank below that of species that can receive a name. In botany and mycology, under the International Code of Nomenclature for algae, fungi, and plants, other infraspecific ranks, such as variety, may be named. In bacteriology and virology, under standard bacterial nomenclature and virus nomenclature, there are recommendations but not strict requirements for recognizing other important infraspecific ranks.

Genus (/ˈdʒiːnəs/; pl.: genera /ˈdʒɛnərə/) is a taxonomic rank above species and below family as used in the biological classification of living and fossil organisms as well as viruses. In binomial nomenclature, the genus name forms the first part of the binomial species name for each species within the genus.

The composition of a genus is determined by taxonomists. The standards for genus classification are not strictly codified, so different authorities often produce different classifications for genera. There are some general practices used, however, including the idea that a newly defined genus should fulfill these three criteria to be descriptively useful:

Plant taxonomy is the science that finds, identifies, describes, classifies, and names plants. It is one of the main branches of taxonomy—the science that finds, describes, classifies, and names living organisms.

Plant taxonomy is closely allied to plant systematics, and there is no sharp boundary between the two. In practice, "plant systematics" involves relationships between plants and their evolution, especially at the higher levels, whereas "plant taxonomy" deals with the actual handling of plant specimens. The precise relationship between taxonomy and systematics, however, has changed along with the goals and methods employed.

A language family is a group of languages related through descent from a common ancestor, called the proto-language of that family. The term family is a metaphor borrowed from biology, with the tree model used in historical linguistics analogous to a family tree, or to phylogenetic trees of taxa used in evolutionary taxonomy. Linguists thus describe the daughter languages within a language family as being genetically related. The divergence of a proto-language into daughter languages typically occurs through geographical separation, with different regional dialects of the proto-language undergoing different language changes and thus becoming distinct languages over time.

One well-known example of a language family is the Romance languages, including Spanish, French, Italian, Portuguese, Romanian, Catalan, Romansh, and many others, all of which are descended from Vulgar Latin. The Romance family itself is part of the larger Indo-European family, which includes many other languages native to Europe and South Asia, all believed to have descended from a common ancestor known as Proto-Indo-European.

Marine prokaryotes are marine bacteria and marine archaea. They are defined by their habitat as prokaryotes that live in marine environments, that is, in the saltwater of seas or oceans or the brackish water of coastal estuaries. All cellular life forms can be divided into prokaryotes and eukaryotes. Eukaryotes are organisms whose cells have a nucleus enclosed within membranes, whereas prokaryotes are the organisms that do not have a nucleus enclosed within a membrane. The three-domain system of classifying life adds another division: the prokaryotes are divided into two domains of life, the microscopic bacteria and the microscopic archaea, while everything else, the eukaryotes, become the third domain.

Prokaryotes play important roles in ecosystems as decomposers recycling nutrients. Some prokaryotes are pathogenic, causing disease and even death in plants and animals. Marine prokaryotes are responsible for significant levels of the photosynthesis that occurs in the ocean, as well as significant cycling of carbon and other nutrients.