Taxonomy (biology) in the context of Festuca

Biogeography is the study of the distribution of species and ecosystems in geographic space and through geological time. Organisms and biological communities often vary in a regular fashion along geographic gradients of latitude, elevation, isolation and habitat area. Phytogeography is the branch of biogeography that studies the distribution of plants, Zoogeography is the branch that studies distribution of animals, while Mycogeography is the branch that studies distribution of fungi, such as mushrooms.

Knowledge of spatial variation in the numbers and types of organisms is as vital to us today as it was to our early human ancestors, as we adapt to heterogeneous but geographically predictable environments. Biogeography is an integrative field of inquiry that unites concepts and information from ecology, evolutionary biology, taxonomy, geology, physical geography, palaeontology, and climatology.

The Natural History Museum in London is a museum that exhibits a vast range of specimens from various segments of natural history. It is one of three major museums on Exhibition Road in South Kensington, the others being the Science Museum and the Victoria and Albert Museum. The Natural History Museum's main frontage, however, is on Cromwell Road.

The museum is home to life and earth science specimens comprising some 80 million items within five main collections: botany, entomology, mineralogy, palaeontology and zoology. The museum is a centre of research specialising in taxonomy, identification and conservation. Given the age of the institution, many of the collections have great historical as well as scientific value, such as specimens collected by Charles Darwin. The museum is particularly famous for its exhibition of dinosaur skeletons and ornate architecture—sometimes dubbed a cathedral of nature—both exemplified by the large Diplodocus cast that dominated the vaulted central hall before it was replaced in 2017 with the skeleton of a blue whale hanging from the ceiling. The Natural History Museum Library contains an extensive collection of books, journals, manuscripts, and artwork linked to the work and research of the scientific departments; access to the library is by appointment only. The museum is recognised as the pre-eminent centre of natural history and research of related fields in the world.

A species (pl. species) is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. It can be defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring, typically by sexual reproduction. Other ways of defining species include their karyotype, DNA sequence, morphology, behaviour, or ecological niche. In addition, palaeontologists use the concept of the chronospecies since fossil reproduction cannot be examined. The most recent rigorous estimate for the total number of species of eukaryotes is between 8 and 8.7 million. About 14% of these had been described by 2011. All species (except viruses) are given a two-part name, a "binomen". The first part of a binomen is the name of a genus to which the species belongs. The second part is called the specific name or the specific epithet (in botanical nomenclature, also sometimes in zoological nomenclature). For example, Boa constrictor is one of the species of the genus Boa, with constrictor being the specific name.

While the definitions given above may seem adequate at first glance, when looked at more closely they represent problematic species concepts. For example, the boundaries between closely related species become unclear with hybridisation, in a species complex of hundreds of similar microspecies, and in a ring species. Also, among organisms that reproduce only asexually, the concept of a reproductive species breaks down, and each clonal lineage is potentially a microspecies. Although none of these are entirely satisfactory definitions, and while the concept of species may not be a perfect model of life, it is still a useful tool to scientists and conservationists for studying life on Earth, regardless of the theoretical difficulties. If species were fixed and distinct from one another, there would be no problem, but evolutionary processes cause species to change. This obliges taxonomists to decide, for example, when enough change has occurred to declare that a fossil lineage should be divided into multiple chronospecies, or when populations have diverged to have enough distinct character states to be described as cladistic species.

Family (Latin: familia, pl.: familiae) is one of the eight major hierarchical taxonomic ranks in Linnaean taxonomy. It is classified between order and genus. A family may be divided into subfamilies, which are intermediate ranks between the ranks of family and genus. The official family names are Latin in origin; however, popular names are often used: for example, walnut trees and hickory trees belong to the family Juglandaceae, but that family is commonly referred to as the "walnut family".

The delineation of what constitutes a family—or whether a described family should be acknowledged—is established and decided upon by active taxonomists. There are not strict regulations for outlining or acknowledging a family, yet in the realm of plants, these classifications often rely on both the vegetative and reproductive characteristics of plant species. Taxonomists frequently hold varying perspectives on these descriptions, leading to a lack of widespread consensus within the scientific community for extended periods.

Oleaceae (/ˌoʊliˈeɪsi.iː, -ˌaɪ/), also known as the olive family or sometimes the lilac family, is a taxonomic family of flowering shrubs, trees, and a few lianas in the order Lamiales. It presently comprises 28 genera, one of which is recently extinct. The extant genera include Cartrema, which was resurrected in 2012. The number of species in the Oleaceae is variously estimated in a wide range around 700. The flowers are often numerous and highly odoriferous. The family has a subcosmopolitan distribution, ranging from the subarctic to the southernmost parts of Africa, Australia, and South America. Notable members include olive, ash, jasmine, and several popular ornamental plants including privet, forsythia, fringetrees, and lilac.

In biological classification, subspecies (pl.: subspecies) is a rank below species, used for populations that live in different areas and vary in size, shape, or other physical characteristics (morphology), but that can successfully interbreed. Not all species have subspecies, but for those that do there must be at least two. Subspecies is abbreviated as subsp. or ssp. and the singular and plural forms are the same ("the subspecies is" or "the subspecies are").

In zoology, under the International Code of Zoological Nomenclature, the subspecies is the only taxonomic rank below that of species that can receive a name. In botany and mycology, under the International Code of Nomenclature for algae, fungi, and plants, other infraspecific ranks, such as variety, may be named. In bacteriology and virology, under standard bacterial nomenclature and virus nomenclature, there are recommendations but not strict requirements for recognizing other important infraspecific ranks.

Genus (/ˈdʒiːnəs/; pl.: genera /ˈdʒɛnərə/) is a taxonomic rank above species and below family as used in the biological classification of living and fossil organisms as well as viruses. In binomial nomenclature, the genus name forms the first part of the binomial species name for each species within the genus.

The composition of a genus is determined by taxonomists. The standards for genus classification are not strictly codified, so different authorities often produce different classifications for genera. There are some general practices used, however, including the idea that a newly defined genus should fulfill these three criteria to be descriptively useful:

Plant taxonomy is the science that finds, identifies, describes, classifies, and names plants. It is one of the main branches of taxonomy—the science that finds, describes, classifies, and names living organisms.

Plant taxonomy is closely allied to plant systematics, and there is no sharp boundary between the two. In practice, "plant systematics" involves relationships between plants and their evolution, especially at the higher levels, whereas "plant taxonomy" deals with the actual handling of plant specimens. The precise relationship between taxonomy and systematics, however, has changed along with the goals and methods employed.

A language family is a group of languages related through descent from a common ancestor, called the proto-language of that family. The term family is a metaphor borrowed from biology, with the tree model used in historical linguistics analogous to a family tree, or to phylogenetic trees of taxa used in evolutionary taxonomy. Linguists thus describe the daughter languages within a language family as being genetically related. The divergence of a proto-language into daughter languages typically occurs through geographical separation, with different regional dialects of the proto-language undergoing different language changes and thus becoming distinct languages over time.

One well-known example of a language family is the Romance languages, including Spanish, French, Italian, Portuguese, Romanian, Catalan, Romansh, and many others, all of which are descended from Vulgar Latin. The Romance family itself is part of the larger Indo-European family, which includes many other languages native to Europe and South Asia, all believed to have descended from a common ancestor known as Proto-Indo-European.

Marine prokaryotes are marine bacteria and marine archaea. They are defined by their habitat as prokaryotes that live in marine environments, that is, in the saltwater of seas or oceans or the brackish water of coastal estuaries. All cellular life forms can be divided into prokaryotes and eukaryotes. Eukaryotes are organisms whose cells have a nucleus enclosed within membranes, whereas prokaryotes are the organisms that do not have a nucleus enclosed within a membrane. The three-domain system of classifying life adds another division: the prokaryotes are divided into two domains of life, the microscopic bacteria and the microscopic archaea, while everything else, the eukaryotes, become the third domain.

Prokaryotes play important roles in ecosystems as decomposers recycling nutrients. Some prokaryotes are pathogenic, causing disease and even death in plants and animals. Marine prokaryotes are responsible for significant levels of the photosynthesis that occurs in the ocean, as well as significant cycling of carbon and other nutrients.

Marine fungi are species of fungi that live in marine or estuarine environments. They are not a taxonomic group, but share a common habitat. Obligate marine fungi grow exclusively in the marine habitat while wholly or sporadically submerged in sea water. Facultative marine fungi normally occupy terrestrial or freshwater habitats, but are capable of living or even sporulating in a marine habitat.

Marine fungi account for about 5% of the total ocean biomass. About 2,149 species of marine fungi have been described, within eleven phyla and 856 genera, although only about 64 species have been fully genetically sequenced. Many species of marine fungi are known only from spores and it is likely a large number of species have yet to be discovered. It has been estimated that less than 1% of all marine fungal species have been described, due to difficulty in targeting marine fungal DNA and difficulties that arise in attempting to grow cultures of marine fungi. It is impracticable to culture many of these fungi, but their nature can be investigated by examining seawater samples and undertaking rDNA analysis of the fungal material found.

Marine biology is the scientific study of the biology of marine life, organisms that inhabit the sea. Given that in biology many phyla, families and genera have some species that live in the sea and others that live on land, marine biology classifies species based on the environment rather than on taxonomy.

A large proportion of all life on Earth lives in the ocean. The exact size of this "large proportion" is unknown, since many ocean species are still to be discovered. The ocean is a complex three-dimensional world, covering approximately 71% of the Earth's surface. The habitats studied in marine biology include everything from the tiny layers of surface water in which organisms and abiotic items may be trapped in surface tension between the ocean and atmosphere, to the depths of the oceanic trenches, sometimes 10,000 meters or more beneath the surface of the ocean.

Archaea (/ɑːrˈkiːə/ ar-KEE-ə) is a domain of organisms. Traditionally, Archaea included only its prokaryotic members, but has since been found to be paraphyletic, as eukaryotes are known to have evolved from archaea. Even though the domain Archaea cladistically includes eukaryotes, the term archaea (sing. archaeon /ɑːrˈkiːɒn/ ar-KEE-on; from Ancient Greek ἀρχαῖον arkhaîon 'ancient') in English still generally refers specifically to prokaryotic members of Archaea. Archaea were initially classified as bacteria, receiving the name archaebacteria (/ˌɑːrkibækˈtɪəriə/, in the Archaebacteria kingdom), but this term has fallen out of use. Archaeal cells have unique properties separating them from Bacteria and Eukaryota, including: cell membranes made of ether-linked lipids; metabolisms such as methanogenesis; and a unique motility structure known as an archaellum. Archaea are further divided into multiple recognized phyla. Classification is difficult because most have not been isolated in a laboratory and have been detected only by their gene sequences in environmental samples. It is unknown if they can produce endospores.

Archaea are often similar to bacteria in size and shape, although a few have very different shapes, such as the flat, square cells of Haloquadratum walsbyi. Despite this, archaea possess genes and several metabolic pathways that are more closely related to those of eukaryotes, notably for the enzymes involved in transcription and translation. Other aspects of archaeal biochemistry are unique, such as their reliance on ether lipids in their cell membranes, including archaeols. Archaea use more diverse energy sources than eukaryotes, ranging from organic compounds such as sugars, to ammonia, metal ions or even hydrogen gas. The salt-tolerant Halobacteria use sunlight as an energy source, and other species of archaea fix carbon (autotrophy), but unlike cyanobacteria, no known species of archaea does both. Archaea reproduce asexually by binary fission, fragmentation, or budding; unlike bacteria, no known species of Archaea form endospores. The first observed archaea were extremophiles, living in extreme environments such as hot springs and salt lakes with no other organisms. Improved molecular detection tools led to the discovery of archaea in almost every habitat, including soil, oceans, and marshlands. Archaea are particularly numerous in the oceans, and the archaea in plankton may be one of the most abundant groups of organisms on the planet.

An evolutionary radiation is an increase in taxonomic diversity that is caused by elevated rates of speciation, that may or may not be associated with an increase in morphological disparity. A significantly large and diverse radiation within a relatively short geologic time scale (e.g. a period or epoch) is often referred to as an explosion. Radiations may affect one clade or many, and be rapid or gradual; where they are rapid, and driven by a single lineage's adaptation to their environment, they are termed adaptive radiations.

The Ediacaran (/ˌiːdiˈækərən/ EE-dee-ACK-ər-ən; formerly Vendian) biota is a taxonomic period classification that consists of all life forms that were present on Earth during the Ediacaran Period (c. 635–538.8 Mya). These were enigmatic tubular and frond-shaped, mostly sessile, organisms. Trace fossils of these organisms have been found worldwide, and represent the earliest known complex multicellular organisms. The term "Ediacara biota" has received criticism from some scientists due to its alleged inconsistency, arbitrary exclusion of certain fossils, and inability to be precisely defined.

The Ediacaran biota may have undergone evolutionary radiation in a proposed event called the Avalon explosion, 575 million years ago. This was after the Earth had thawed from the Cryogenian period's extensive glaciation. This biota largely disappeared with the rapid increase in biodiversity known as the Cambrian explosion. Most of the currently existing body plans of animals first appeared in the fossil record of the Cambrian rather than the Ediacaran. For macroorganisms, the Cambrian biota appears to have almost completely replaced the organisms that dominated the Ediacaran fossil record, although relationships are still a matter of debate.

Mollusca is a phylum of protostomic invertebrate animals, whose members are known as molluscs or mollusks (/ˈmɒləsks/). Around 76,000 extant species of molluscs are recognized, making it the second-largest animal phylum after Arthropoda. The number of additional fossil species is estimated between 60,000 and 100,000, and the proportion of undescribed species is very high. Many taxa remain poorly studied.

Molluscs are the largest marine phylum, comprising about 23% of all the named marine organisms. They are highly diverse, not just in size and anatomical structure, but also in behaviour and habitat, as numerous groups are freshwater and even terrestrial species. The phylum is typically divided into 7 or 8 taxonomic classes, of which two are entirely extinct. Cephalopod molluscs, such as squid, cuttlefish, and octopuses, are among the most neurologically advanced of all invertebrates—and either the giant squid or the colossal squid is the largest known extant invertebrate species. The gastropods (snails, slugs and abalone) are by far the most diverse class and account for 80% of the total classified molluscan species.

Plankton are organisms that drift in water (or air) but are unable to actively propel themselves against currents (or wind). Marine plankton include drifting organisms that inhabit the saltwater of oceans and the brackish waters of estuaries. Freshwater plankton are similar to marine plankton, but are found in lakes and rivers. An individual plankton organism in the plankton is called a plankter. In the ocean plankton provide a crucial source of food, particularly for larger filter-feeding animals, such as bivalves, sponges, forage fish and baleen whales.

Plankton includes organisms from species across all the major biological kingdoms, ranging in size from the microscopic (such as bacteria, archaea, protozoa and microscopic algae and fungi) to larger organisms (such as jellyfish and ctenophores). This is because plankton are defined by their ecological niche and level of motility rather than by any phylogenetic or taxonomic classification. The plankton category differentiates organisms from those that can swim against a current, called nekton, and those that live on the deep sea floor, called benthos. Organisms that float on or near the water's surface are called neuston. Neuston that drift as water currents or wind take them, and lack the swimming ability to counter this, form a special subgroup of plankton. Mostly plankton just drift where currents take them, though some, like jellyfish, swim slowly but not fast enough to generally overcome the influence of currents.

Taxodium /tækˈsoʊdiəm/ is a genus of one to three species (depending on taxonomic opinion) of extremely flood-tolerant conifers in the cypress family, Cupressaceae. The name is derived from the Latin word taxus, meaning "yew", and the Greek word εἶδος (eidos), meaning "similar to." Within the family, Taxodium is most closely related to Chinese swamp cypress (Glyptostrobus pensilis) and sugi (Cryptomeria japonica).

Species of Taxodium occur in the southern part of the North American continent and are deciduous in the north and semi-evergreen to evergreen in the south. They are large trees, reaching 100–150 ft (30–46 m) tall and 6.5–10 ft (2–3 m) (exceptionally 36 ft or 11 m) trunk diameter. The needle-like leaves, 0.2–0.8 in (0.5–2 cm) long, are borne spirally on the shoots, twisted at the base so as to appear in two flat rows on either side of the shoot. The cones are globose, 0.8–1.4 in (2–3.5 cm) diameter, with 10–25 scales, each scale with one or two seeds; they are mature in 7–9 months after pollination, when they disintegrate to release the seeds. The male (pollen) cones are produced in pendulous racemes, and shed their pollen in early spring. Taxodium species grow cypress knees, when growing in or beside water. The function of these knees is currently a subject of ongoing research.

This page features lists of species and organisms that have become extinct. The reasons for extinction range from natural occurrences, such as shifts in the Earth's ecosystem or natural disasters, to human influences on nature by hunting and destruction of natural habitats.

A species is presumed to be extinct after surveys of its expected and historical habitat demonstrates an inability to locate an individual. Species which meet this criteria but are known to be kept in captivity are extinct in the wild. If a final specimen of a moribund species is found, it is an endling.