Interbreeding between archaic and modern humans in the context of "Interbreeding"

Neanderthals became extinct around 40,000 years ago. Hypotheses on the causes of the extinction include violence, transmission of diseases from modern humans to which Neanderthals had no immunity, competitive replacement, extinction by interbreeding with early modern human populations, natural catastrophes, climate change and inbreeding depression. It is likely that multiple factors caused the demise of an already low population.

Neanderthals (/niˈændərˌtɑːl, neɪ-, -ˌθɑːl/ nee-AN-də(r)-TAHL, nay-, -⁠THAHL; Homo neanderthalensis or sometimes Homo sapiens neanderthalensis) are an extinct group of archaic humans who inhabited Europe and Western and Central Asia during the Middle to Late Pleistocene. Neanderthal extinction occurred roughly 40,000 years ago with the immigration of modern humans (Cro-Magnons), but Neanderthals in Gibraltar may have persisted for thousands of years longer.

The first recognised Neanderthal fossil, Neanderthal 1, was discovered in 1856 in the Neander Valley, Germany. At first, Neanderthal 1 was considered to be one of the lower races in accord with historical race concepts. As more fossils were discovered through the early 20th century, Neanderthals were characterised as a unique species of underdeveloped human, in particular by Marcellin Boule. By the mid-twentieth century, it was believed that human evolution progressed from an ape-like ancestor through a "Neanderthal phase" to modern humans. This gave way to the "Out of Africa" theory in the 1970s. With the sequencing of Neanderthal genetics first in 2010, it was discovered that Neanderthals interbred with modern humans.

Peking Man (Homo erectus pekinensis, originally "Sinanthropus pekinensis") is a subspecies of H. erectus which inhabited what is now northern China during the Middle Pleistocene. Its fossils have been found in a cave some 50 km (31 mi) southwest of Beijing (referred to in the West as Peking upon its first discovery), known as the Zhoukoudian Peking Man Site. The first fossil, a tooth, was discovered in 1921, and Zhoukoudian has since become the most productive H. erectus site in the world. Peking Man was instrumental in the foundation of Chinese anthropology, and fostered an important dialogue between Western and Eastern science. Peking Man became the centre of anthropological discussion, and was classified as a direct human ancestor, propping up the Out of Asia theory that humans evolved in Asia.

Peking Man also played a vital role in the restructuring of Chinese identity following the Chinese Communist Revolution, and it was used to introduce the general populace to Marxism and science. Early models of Peking Man society were compared to communist or nationalist ideals, leading to discussions on primitive communism and polygenism (that Peking Man was the direct ancestor of Chinese people). This produced a strong schism between Western and Eastern interpretations of the origin of modern humans, especially as the West adopted the Out of Africa theory in the late 20th century, which described Peking Man as an offshoot in human evolution. Though Out of Africa is now the consensus, Peking Man interbreeding with human ancestors is still discussed.

Neanderthal genetics testing became possible in the 1990s with advances in ancient DNA analysis. In 2008, the Neanderthal genome project published the full sequence Neanderthal mitochondrial DNA (mtDNA), and in 2010 the full Neanderthal genome. Genetic data is useful in testing hypotheses about Neanderthal evolution and their divergence from early modern humans, as well as understanding Neanderthal demography, and interbreeding between archaic and modern humans.

Modern humans and Neanderthals had multiple different interbreeding episodes, but Neanderthal-derived genes in the present-day human genome descends from an episode 250,000 years ago probably in Eurasia, and 47,000 to 65,000 years ago in the Near East. While 20% of the Neanderthal genome survives today, most people only carry about a few percentage points of Neanderthal DNA, and most Neanderthal-derived DNA is non-coding. Neanderthals maintained a low genetic diversity and suffered from inbreeding depression; consequently most Neanderthal genes were probably selected out of the gene pool. Barring hybrid incompatibility or negative selection, most Neanderthal DNA may descend from the children of modern human females and Neanderthal males. Neanderthals also interbred with Denisovans in the Siberian Altai Mountains.