Genetic diversity in the context of "Genetic operators"

A genetic isolate is a population of organisms that has little to no genetic mixing with other organisms of the same species due to geographic isolation or other factors that prevent reproduction. Genetic isolates form new species through an evolutionary process known as speciation. All modern species diversity is a product of genetic isolates and evolution.

The current distribution of genetic differences and isolation within and among populations is also influenced by genetic processes. The resulting genetic diversity within a species' distribution range is frequently unequally distributed, and significant disparities can occur when population dispersion and isolation are critical for species survival.

Ecosystem diversity deals with the variations in ecosystems within a geographical location and its overall impact on human existence and the environment.

Ecosystem diversity addresses the combined characteristics of biotic properties which are living organisms (biodiversity) and abiotic properties such as nonliving things like water or soil (geodiversity). It is a variation in the ecosystems found in a region or the variation in ecosystems over the whole planet. Ecological diversity includes the variation in both terrestrial and aquatic ecosystems. Ecological diversity can also take into account the variation in the complexity of a biological community, including the number of different niches, the number of and other ecological processes. An example of ecological diversity on a global scale would be the variation in ecosystems, such as deserts, forests, grasslands, wetlands and oceans. Ecological diversity is the largest scale of biodiversity, and within each ecosystem, there is a great deal of both species and genetic diversity.

Inbreeding depression is the reduced biological fitness caused by loss of genetic diversity as a result of inbreeding, or mating between closely related individuals within a species. This reduction of fitness occurs because inbreeding increases genetic similarity, which can amplify harmful genes and overall decreases diversity. Inbreeding depression is often attributed to small population size, often stemming from a population bottleneck, where low genetic variation restricts a species’ ability to adapt.

Biological fitness refers to an organism’s capability to survive and transmit its genetic material to the next generation. Higher genetic variation within a breeding population increases the fitness and survivability of a species. Inbreeding depression appears to be present in most populations of organisms but varies across mating systems. In summary, inbreeding depression demonstrates the importance of genetic diversity within populations of species and how it contributes to natural selection.

Severe acute respiratory syndrome coronavirus 2 (SARS‑CoV‑2) is a coronavirus that causes COVID-19, the respiratory illness responsible for the COVID-19 pandemic that began in late 2019. The virus previously had the provisional name 2019 novel coronavirus (2019-nCoV), and has also been called human coronavirus 2019 (HCoV-19 or hCoV-19). First identified in the city of Wuhan, Hubei, China, the World Health Organization designated the outbreak a public health emergency of international concern from January 30, 2020, to May 5, 2023. SARS‑CoV‑2 is a positive-sense single-stranded RNA virus that is contagious in humans.

SARS‑CoV‑2 is a virus of the species Betacoronavirus pandemicum (SARSr-CoV), as is SARS-CoV-1, the virus that caused the 2002–2004 SARS outbreak. Some animal-borne coronaviruses are more closely related to SARS-CoV-2 than SARS-CoV-1 is. The closest known relative is the BANAL-52 bat coronavirus. SARS-CoV-2 is of zoonotic origin; its close genetic similarity to bat coronaviruses suggests it emerged from such a bat-borne virus. Research is ongoing as to whether SARS‑CoV‑2 came directly from bats or indirectly through any intermediate hosts. The virus shows little genetic diversity, indicating that the spillover event introducing SARS‑CoV‑2 to humans is likely to have occurred in late 2019.

A Vavilov centre or centre of origin is a geographical area where a group of organisms, either domesticated or wild, first developed its distinctive properties. Centers of origin were first identified in 1924 by Nikolai Vavilov. Vavilov posited that the center of origin for a species or genus is the same as its center of diversity, the geographic area where it has the highest genetic diversity, but this equivalence has been disputed by later scholars.

Neanderthal genetics testing became possible in the 1990s with advances in ancient DNA analysis. In 2008, the Neanderthal genome project published the full sequence Neanderthal mitochondrial DNA (mtDNA), and in 2010 the full Neanderthal genome. Genetic data is useful in testing hypotheses about Neanderthal evolution and their divergence from early modern humans, as well as understanding Neanderthal demography, and interbreeding between archaic and modern humans.

Modern humans and Neanderthals had multiple different interbreeding episodes, but Neanderthal-derived genes in the present-day human genome descends from an episode 250,000 years ago probably in Eurasia, and 47,000 to 65,000 years ago in the Near East. While 20% of the Neanderthal genome survives today, most people only carry about a few percentage points of Neanderthal DNA, and most Neanderthal-derived DNA is non-coding. Neanderthals maintained a low genetic diversity and suffered from inbreeding depression; consequently most Neanderthal genes were probably selected out of the gene pool. Barring hybrid incompatibility or negative selection, most Neanderthal DNA may descend from the children of modern human females and Neanderthal males. Neanderthals also interbred with Denisovans in the Siberian Altai Mountains.

Out-crossing or out-breeding is the technique of crossing between different breeds. This is the practice of introducing distantly related genetic material into a breeding line, thereby increasing genetic diversity.

A variety of objective means exist to empirically measure biodiversity. Each measure relates to a particular use of the data, and is likely to be associated with the variety of genes. Biodiversity is commonly measured in terms of taxonomic richness of a geographic area over a time interval. In order to calculate biodiversity, species evenness, species richness, and species diversity are to be obtained first. Species evenness is the relative number of individuals of each species in a given area. Species richness is the number of species present in a given area. Species diversity is the relationship between species evenness and species richness. There are many ways to measure biodiversity within a given ecosystem. However, the two most popular are Shannon-Weaver diversity index, commonly referred to as Shannon diversity index, and the other is Simpsons diversity index. Although many scientists prefer to use Shannon's diversity index simply because it takes into account species richness.

Biodiversity is usually plotted as the richness of a geographic area, with some reference to a temporal scale. Types of biodiversity include taxonomic or species, ecological, morphological, and genetic diversity. Taxonomic diversity, that is the number of species, genera, family is the most commonly assessed type. A few studies have attempted to quantitatively clarify the relationship between different types of diversity. For example, the biologist Sarda Sahney has found a close link between vertebrate taxonomic and ecological diversity.