Ernst Mayr in the context of "Gregor Mendel"

Orthogenesis, also known as orthogenetic evolution, progressive evolution, evolutionary progress, or progressionism, is an obsolete biological hypothesis that organisms have an innate tendency to evolve in a definite direction towards some goal (teleology) due to some internal mechanism or "driving force". According to the theory, the largest-scale trends in evolution have an absolute goal such as increasing biological complexity. Prominent historical figures who have championed some form of evolutionary progress include Jean-Baptiste Lamarck, Pierre Teilhard de Chardin, and Henri Bergson.

The term orthogenesis was introduced by Wilhelm Haacke in 1893 and popularized by Theodor Eimer five years later. Proponents of orthogenesis had rejected the theory of natural selection as the organizing mechanism in evolution for a rectilinear (straight-line) model of directed evolution. With the emergence of the modern synthesis, in which genetics was integrated with evolution, orthogenesis and other alternatives to Darwinism were largely abandoned by biologists, but the notion that evolution represents progress is still widely shared; modern supporters include E. O. Wilson and Simon Conway Morris. The evolutionary biologist Ernst Mayr made the term effectively taboo in the journal Nature in 1948, by stating that it implied "some supernatural force". The American paleontologist George Gaylord Simpson (1953) attacked orthogenesis, linking it with vitalism by describing it as "the mysterious inner force". Despite this, many museum displays and textbook illustrations continue to give the impression that evolution is directed.

The modern synthesis was the early 20th-century synthesis of Charles Darwin's theory of evolution and Gregor Mendel's ideas on heredity into a joint mathematical framework. Julian Huxley coined the term in his 1942 book, Evolution: The Modern Synthesis. The synthesis combined the ideas of natural selection, Mendelian genetics, and population genetics. It also related the broad-scale macroevolution seen by palaeontologists to the small-scale microevolution of local populations.

The synthesis was defined differently by its founders, with Ernst Mayr in 1959, G. Ledyard Stebbins in 1966, and Theodosius Dobzhansky in 1974 offering differing basic postulates, though they all include natural selection, working on heritable variation supplied by mutation. Other major figures in the synthesis included E. B. Ford, Bernhard Rensch, Ivan Schmalhausen, and George Gaylord Simpson. An early event in the modern synthesis was R. A. Fisher's 1918 paper on mathematical population genetics, though William Bateson, and separately Udny Yule, had already started to show how Mendelian genetics could work in evolution in 1902.

The two-empire system (two-superkingdom system) was the top-level biological classification system in general use from the early 20th century until the establishment of the three-domain system (which itself is currently being challenged by the two-domain system). It classified cellular life into Prokaryota and Eukaryota as either "empires" or "superkingdoms". When the three-domain system was introduced, some biologists preferred the two-superkingdom system, claiming that the three-domain system overemphasized the division between Archaea and Bacteria. However, given the current state of knowledge and the rapid progress in biological scientific advancement, especially due to genetic analyses, that view has all but vanished.

Some prominent scientists, such as the late Thomas Cavalier-Smith, still hold and held to the two-empire system. The late Ernst Mayr, one of the 20th century's leading evolutionary biologists, wrote dismissively of the three-domain system, "I cannot see any merit at all in a three empire cladification." Additionally, the scientist Radhey Gupta argues for a return to the two-empire system, claiming that the primary division within prokaryotes should be among those surrounded by a single membrane (monoderm), including gram-positive bacteria and archaebacteria, and those with an inner and outer cell membrane (diderm), including gram-negative bacteria.

In population genetics, the founder effect is the loss of genetic variation that occurs when a new population is established by a very small number of individuals from a larger population. It was first fully outlined by Ernst Mayr in 1942, using existing theoretical work by those such as Sewall Wright. As a result of the loss of genetic variation, the new population may be distinctively different, both genotypically and phenotypically, from the parent population from which it is derived. In extreme cases, the founder effect is thought to lead to the speciation and subsequent evolution of new species.

In the figure shown, the original population has nearly equal numbers of blue and red individuals. The three smaller founder populations show that one or the other color may predominate (founder effect), due to random sampling of the original population. A population bottleneck may also cause a founder effect, though it is not strictly a new population.

The mechanisms of reproductive isolation are a collection of evolutionary mechanisms, behaviors and physiological processes critical for speciation. They prevent members of different species from producing offspring, or ensure that any offspring are sterile. These barriers maintain the integrity of a species by reducing gene flow between related species.

The mechanisms of reproductive isolation have been classified in a number of ways. Zoologist Ernst Mayr classified the mechanisms of reproductive isolation in two broad categories: pre-zygotic for those that act before fertilization (or before mating in the case of animals) and post-zygotic for those that act after it. The mechanisms are genetically controlled and can appear in species whose geographic distributions overlap (sympatric speciation) or are separate (allopatric speciation).

Peripatric speciation is a mode of speciation in which a new species is formed from an isolated peripheral population. Since peripatric speciation resembles allopatric speciation, in that populations are isolated and prevented from exchanging genes, it can often be difficult to distinguish between them, and peripatric speciation may be considered one type or model of allopatric speciation. The primary distinguishing characteristic of peripatric speciation is that one of the populations is much smaller than the other, as opposed to (other types of) allopatric speciation, in which similarly-sized populations become separated. The terms peripatric and peripatry are often used in biogeography, referring to organisms whose ranges are closely adjacent but do not overlap, being separated where these organisms do not occur—for example on an oceanic island compared to the mainland. Such organisms are usually closely related (e.g. sister species); their distribution being the result of peripatric speciation.

The concept of peripatric speciation was first outlined by the evolutionary biologist Ernst Mayr in 1954. Since then, other alternative models have been developed such as centrifugal speciation, that posits that a species' population experiences periods of geographic range expansion followed by shrinking periods, leaving behind small isolated populations on the periphery of the main population. Other models have involved the effects of sexual selection on limited population sizes. Other related models of peripherally isolated populations based on chromosomal rearrangements have been developed such as budding speciation and quantum speciation.

Java Man (Homo erectus erectus, formerly also Anthropopithecus erectus or Pithecanthropus erectus) is an early human fossil discovered in 1891 and 1892 on the island of Java (Indonesia). Estimated to be between 700,000 and 1,490,000 years old, it was, at the time of its discovery, the oldest hominid fossil ever found, and it remains the type specimen for Homo erectus.

Led by Eugène Dubois, the excavation team uncovered a tooth, a skullcap, and a thighbone at Trinil on the banks of the Solo River in East Java. Arguing that the fossils represented the "missing link" between apes and humans, Dubois gave the species the scientific name Anthropopithecus erectus, then later renamed it Pithecanthropus erectus. The fossil aroused much controversy. Within a decade of the discovery almost eighty books or articles had been published on Dubois's finds. Despite Dubois's argument, few accepted that Java Man was a transitional form between apes and humans. Some dismissed the fossils as apes and others as modern humans, whereas many scientists considered Java Man as a primitive side branch of evolution not related to modern humans at all. In the 1930s Dubois made the claim that Pithecanthropus was built like a "giant gibbon", a much misinterpreted attempt by Dubois to prove that it was the "missing link". Eventually, similarities between Java Man and Sinanthropus pekinensis (Peking Man) led Ernst Mayr to rename both Homo erectus in 1950, placing them directly in the human evolutionary tree.

George Ledyard Stebbins Jr. (January 6, 1906 – January 19, 2000) was an American botanist and geneticist who is widely regarded as one of the leading evolutionary biologists of the 20th century. Stebbins received his Ph.D. in botany from Harvard University in 1931. He went on to the University of California, Berkeley, where his work with E. B. Babcock on the genetic evolution of plant species, and his association with a group of evolutionary biologists known as the Bay Area Biosystematists, led him to develop a comprehensive synthesis of plant evolution incorporating genetics.

His most important publication was Variation and Evolution in Plants, which combined genetics and Darwin's theory of natural selection to describe plant speciation. It is regarded as one of the main publications which formed the core of the modern synthesis and still provides the conceptual framework for research in plant evolutionary biology; according to Ernst Mayr, "Few later works dealing with the evolutionary systematics of plants have not been very deeply affected by Stebbins' work." He also researched and wrote widely on the role of hybridization and polyploidy in speciation and plant evolution; his work in this area has had a lasting influence on research in the field.

Conrad Hal Waddington CBE FRS FRSE (8 November 1905 – 26 September 1975) was a British developmental biologist, paleontologist, geneticist, embryologist and philosopher who laid the foundations for systems biology, epigenetics, and evolutionary developmental biology.

His theory of genetic assimilation probably has a Darwinian explanation, which contrast with the fact that Waddington himself was very critic about the notion of natural selection and Neo-Darwinism. Leading evolutionary biologists including Theodosius Dobzhansky and Ernst Mayr considered that Waddington was using genetic assimilation to support so-called Lamarckian inheritance, the acquisition of inherited characteristics through the effects of the environment during an organism's lifetime.